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Name : COB47_0815 (COB47_0815) Accession : YP_003840113.1 Strain : Caldicellulosiruptor obsidiansis OB47 Genome accession: NC_014392 Putative virulence/resistance : Unknown Product : replicative DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 945365 - 946708 bp Length : 1344 bp Strand : + Note : KEGG: ate:Athe_0882 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein DNA sequence : ATGGAGCCCGACATTGTTCAAAATCAAAGTGAGATGCCTGAAAGCCGCGAAGCAGAAGAAGCGGTTGTAGGGGCGATGCT TTTAAGCCGCGAAGTAATTTCTGATGTTACTGAGATTTTGACAGAAGAGGATTTTGCAACGCCCCAGCTAAAAGAGATTT TTGCTGCTATTATGGACCTTTTTGAAGAGGGCAAACCGGTAGATGTCATAACTGTAGCTGAGAGACTGAGAGAAAGAGGT ACATTTGATGCAGTTGGAGGAAATGAGTATCTGACAAACCTTGTGATAAATACTCCGACAACTGCAAATGCTACATATTA TGCAAAGATTGTTGAAGAAAAGTCACTACTTAGGAAACTCATAAACTCTTCAATGAAGATTATTGAAAAGTGTAAGAGTC AGACAGAAAGAGTTGAAGATATTGTTGATTTTGCTGAAAAGACAATCTTCAATGTGATTTCTCACAAAAATTCAAAAGAT TTTTCTCATTTAAAAGAGATATTAATTGAAACATATAACAAGATAGAGGAACTGTATCTCAGAAAATCGCATATTATAGG TGTACCCACAGGATTTGCTGAGTTTGACAGAATGACAGCAGGTCTTCAGCCATCAGACCTGATACTTATTGCAGCAAGAC CTGCAATGGGGAAGACAAGTTTTGCACTCAATATTGTTCAGCATGCAGCTTTGAGAGCTGGTGTGCCCGTAGCGGTATTT AGTCTTGAGATGTCAAAAGAACAGCTTGTAACCCGTATGATTTGCTCAGAAGCAATGATAGATAGCCACAAGCTTAGAAC TGGAAACTTAGAGGATGAAGAGTGGAAAAAGTTTGCAAAAGCTTTAGCACTTTTGTCAAACGCTCCAATTTATATTGACG ATACACCTGCCATAACTGTTGCAGAAATGAGGGCAAAATGTAGAAGACTCAAGCTCAAAGAAAAAGGCCTTGGGCTTGTG ATGGTTGACTATTTGCAGCTTATGACCGCTCGTGGCAGGTTTGAGAGCAAGCAACAGGAAATTGCAGAGATTTCAAGGTC ATTAAAAGCCTTGGCAAGAGAGCTAAATGTTCCTGTACTTGCGCTTTCGCAGCTATCCCGCGCACCTGAAACAAGAGCTG ACCACAGACCTATTCTTTCCGACCTTCGAGAAAGTGGCGCAATTGAACAGGATGCAGACATTGTTGCTTTTTTGTACAGA GATGAGTATTACAATCCTGACACTGACAAAAAACACATTGCAGAGCTAATAATTGCAAAGCACAGAAATGGACCTACTGG CACAATTGAACTTCTTTTCTTGGACAAACATACCAAGTTCAAAGATTTGGAGAAGAATAGATAA Protein sequence : MEPDIVQNQSEMPESREAEEAVVGAMLLSREVISDVTEILTEEDFATPQLKEIFAAIMDLFEEGKPVDVITVAERLRERG TFDAVGGNEYLTNLVINTPTTANATYYAKIVEEKSLLRKLINSSMKIIEKCKSQTERVEDIVDFAEKTIFNVISHKNSKD FSHLKEILIETYNKIEELYLRKSHIIGVPTGFAEFDRMTAGLQPSDLILIAARPAMGKTSFALNIVQHAALRAGVPVAVF SLEMSKEQLVTRMICSEAMIDSHKLRTGNLEDEEWKKFAKALALLSNAPIYIDDTPAITVAEMRAKCRRLKLKEKGLGLV MVDYLQLMTARGRFESKQQEIAEISRSLKALARELNVPVLALSQLSRAPETRADHRPILSDLRESGAIEQDADIVAFLYR DEYYNPDTDKKHIAELIIAKHRNGPTGTIELLFLDKHTKFKDLEKNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 2e-64 | 43 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 6e-65 | 42 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 1e-66 | 41 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 6e-62 | 41 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 8e-66 | 41 |
