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Name : COB47_0805 (COB47_0805) Accession : YP_003840103.1 Strain : Caldicellulosiruptor obsidiansis OB47 Genome accession: NC_014392 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 935642 - 936904 bp Length : 1263 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; KEGG: ate:Athe_0872 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGCTTGATTTAAAATATATAAGGGCAAACCCGGAAAAGGTCCAGGAAGGGCTTTCTAAAAGAAACAAAGACATTTCAAT TGCGCCTATTTTAGAGCTTGATGAAAAAAGAAGAAAGCTTTTGGCTGAGGTTGAAAGCCTGAAAGCTCTGCAGAATCAAA AATCTAAAGAGGTTCCAAAGCTTAAAAAGGAAGGTAAAGATGTAACAGGTCTTATGAATGAGCTAAAAGAGCTGTCTGAT AAGATTAAAGAATTAGATAGCAAGGTTAAAGATGTTGAAGATGAGATAGAAAAGATTTTGCTCACCATTCCAAACATACC TCATGAGTCTGTGCCAGTTGGTAAAGACGATACAGAAAATGTTGAAGTAAGGCGCTGGGGTGAGGTAAGAGAACCTGATT TTATAATAAAGCCTCATTGGGAAATTGGTGTAAATCTTGGAATTTTAGATTTTGAAAGAGCTTCAAAAGTGTCAGGGAGC CGTTTTACTTTCTATAGAGGACTTGGTGCAAGACTTGAGAGAGCTTTGATTAACTTTATGCTTGACCTTCACATTGAAAA GCATGGCTATACTGAACTATTTCCGCCTTTTTTGGTTGCGAGAAAGTCTATGATAGGCACAGGACAGCTTCCCAAATTTG AAGAGGATGCATTTAAGACAACAGATGATTACTTTTTGATACCAACAGCAGAAGTTCCTGTTACAAACTACCACAGAGAA GAGATATTAAAAGAAGAAGATCTTCCGATAAAATATGTTGCGTATTCTGCATGTTTCAGGGCAGAGGCGGGTGCAGCCGG CAAAGACACAAGAGGGCTTATTCGTCAGCATCAATTTAACAAGGTTGAGCTTGTGAAGTTTGCGAAGCCAGAAGATTCTT ATGATGAGCTTGAAAAACTCACAGCTGATGCAGAGGATGTTTTAAGGGAATTAGGACTTCCTTACAGGGTTGTACTTCTT TGCTCAGGTGATTTAGGATTTTCTTCTGCAAAGACATACGACATTGAAGTCTGGATGCCAAGCTATGGAAGATATGTTGA GATTTCTTCTTGTTCAAACTTTGAAAGCTATCAAGCACGAAGGGCAAATATCAGATTCAGAAGGAAGGATGGAAAACTTG ACTATGTTCATACGCTAAACGGCTCAGGACTTGCTGTAGGAAGGACTTTGGCAGCAATACTTGAAAATTTCCAGCAAAAA GATGGAACAGTAGTTGTTCCAGAGGTTTTGAGAAGGTATATGGGTACAGATGTGATAAAATGA Protein sequence : MLDLKYIRANPEKVQEGLSKRNKDISIAPILELDEKRRKLLAEVESLKALQNQKSKEVPKLKKEGKDVTGLMNELKELSD KIKELDSKVKDVEDEIEKILLTIPNIPHESVPVGKDDTENVEVRRWGEVREPDFIIKPHWEIGVNLGILDFERASKVSGS RFTFYRGLGARLERALINFMLDLHIEKHGYTELFPPFLVARKSMIGTGQLPKFEEDAFKTTDDYFLIPTAEVPVTNYHRE EILKEEDLPIKYVAYSACFRAEAGAAGKDTRGLIRQHQFNKVELVKFAKPEDSYDELEKLTADAEDVLRELGLPYRVVLL CSGDLGFSSAKTYDIEVWMPSYGRYVEISSCSNFESYQARRANIRFRRKDGKLDYVHTLNGSGLAVGRTLAAILENFQQK DGTVVVPEVLRRYMGTDVIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-116 | 58 |
