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Name : COB47_0615 (COB47_0615) Accession : YP_003839919.1 Strain : Caldicellulosiruptor obsidiansis OB47 Genome accession: NC_014392 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 721294 - 722781 bp Length : 1488 bp Strand : + Note : KEGG: ate:Athe_0659 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type DNA sequence : ATGCAGGATTTTGAGTTTACACAGGATGAGCTAAACGAGCAGATACAAAACAGGATAAAAAAACTTCGAGAACTTCAGCA GAATAAATACAATCCATATGAAAAGGTAAAATACGACCCGACACATTATTCTACTGATATTAAAGAGAACTTTGACCAGT TTGAAGGTAAGTTTGTCTGTGTTGCAGGAAGAATGCTTTCAAAAAGAGGTCATGGTAAGGCTTCGTTTGTGGATATTTTG GACACAAAAGGGAAAATCCAGATTTATATAAAGATTGATGAAGTTGGAGAAGAAAAGTATCAAGAGTTCAAAGAGTATTA TGATATTGGAGATATAATAGGGGTAAAAGGTGAGGTTTTCAAGACTCACAAAGGTGAGGTCTCAATAAAAGCAAAAGAGA TTGAGATGCTCACCAAGTGTTTGCGACCACTTCCTGAAAAGTGGCATGGACTTAGAGATGTTGATACAAGGTATAGAAAA AGGTATCTTGACCTGATTGTAAATCCTCAGGTTCGGGATACTTTTATTAAAAGAAGCTTGATAATCCGTTCAATCCGTAA ATTTTTAGATGACAGAGGATTTTTGGAGGTAGAAACTCCTGTTTTGAGCCCTATTGCAGGTGGTGCTGCTGCAAGACCGT TTATTACACATCATAACGCGCTTGATATTGATTTATATTTGAGAATTGCAACAGAGCTTCACTTAAAAAGACTTATAGTT GGTGGTTTTGACAAAGTATACGAGCTTGGTCGTGTGTTTAGAAATGAAGGTATTTCAATAAAACACAATCCTGAATTCAC AACAATTGAGATTTACCAGGCGTATGCTGATTATAAAGATATGATGGATTTAACAGAAGAGCTTATCACCACAGTTGCAC AGGAAGTTTTGAGTACATTAAAAATAACATATCAAGGACAGGAGATTGACCTGACACCACCATGGCAAAGACTTACTATG GTTGAAGCAATCAAAAAGTATGTTGGTGTGGACTTTGAAAATGTTTCTTCGTTGGATGAAGCAAGAAAAATTGCTAAAGA TCTTGGGATTGAGGTTGAGGAAAACTGGCAGGTAGGTCATATTATTAATGAGGTGTTTGAGAAAAAGGTTGAGGATTTTC TTATCCAGCCAACGTTTATAATGGACTATCCGGTTGAAGTTTCTCCGCTTGCAAAGCGCAAAAAAGATAATCCACAGTTT ACAGAGAGGTTTGAGCTTTTTATCACTTGCAGGGAAATTGCAAACGCATTTTCTGAGCTAAACGACCCGTTTGACCAGAA AGAGAGATTTTTAGAGCAGCTTAAAGAAAGGCAGAGAGGCAACCAGGAAGCGCATATGATGGATGAGGATTTTATAGAAG CACTTGAGTACGGCATGCCGCCGACAGGTGGGCTTGGAATAGGAATTGACAGGCTGGTTATGCTTCTGACAGATTCATAT TCAATTAGAGATGTGTTACTTTTCCCAACAATGCGACCGAAGGATTAG Protein sequence : MQDFEFTQDELNEQIQNRIKKLRELQQNKYNPYEKVKYDPTHYSTDIKENFDQFEGKFVCVAGRMLSKRGHGKASFVDIL DTKGKIQIYIKIDEVGEEKYQEFKEYYDIGDIIGVKGEVFKTHKGEVSIKAKEIEMLTKCLRPLPEKWHGLRDVDTRYRK RYLDLIVNPQVRDTFIKRSLIIRSIRKFLDDRGFLEVETPVLSPIAGGAAARPFITHHNALDIDLYLRIATELHLKRLIV GGFDKVYELGRVFRNEGISIKHNPEFTTIEIYQAYADYKDMMDLTEELITTVAQEVLSTLKITYQGQEIDLTPPWQRLTM VEAIKKYVGVDFENVSSLDEARKIAKDLGIEVEENWQVGHIINEVFEKKVEDFLIQPTFIMDYPVEVSPLAKRKKDNPQF TERFELFITCREIANAFSELNDPFDQKERFLEQLKERQRGNQEAHMMDEDFIEALEYGMPPTGGLGIGIDRLVMLLTDSY SIRDVLLFPTMRPKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 6e-111 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| COB47_0615 | YP_003839919.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-111 | 54 |
