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Name : COB47_0553 (COB47_0553) Accession : YP_003839857.1 Strain : Caldicellulosiruptor obsidiansis OB47 Genome accession: NC_014392 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 646425 - 647741 bp Length : 1317 bp Strand : + Note : TIGRFAM: xylose isomerase; KEGG: ate:Athe_0603 xylose isomerase; PFAM: Xylose isomerase domain-containing protein TIM barrel DNA sequence : ATGAAGTACTTCAAAGACATTCCAGAAGTAAAATATGAAGGACCAAAGTCAGACAATCCATTTGCTTTCAAGTACTACAA TCCTGACGAAATTATTGACGGCAAGCCTTTGAAAGACCACCTTCGTTTTGCAGTTGCTTACTGGCATACATTCTGTGCAA CAGGAAGCGACCCGTTTGGACAACCTACAATTACCCGTCCATGGGACAGGTTCTCAAACCCAATGGACAACGCAAAGGCA AGAGTTGAAGCCGCATTTGAGTTTTTTGAAAAGCTAAATGTTCCATTTTTCTGTTTTCATGACAGAGACATTGCACCTGA AGGAGAAAATTTAAGAGAAACAAACAAGAACTTGGATGAGATAGTTTCTATGATCAAAGAATACTTAAACACAAGCAAAA CAAAAGTTTTGTGGGGAACAGCAAACCTATTTTCACATCCGCGATATGTTCATGGTGCTGCAACATCCTGCAATGCCGAT GTTTTTGCATATGCAGCAGCGCAGGTGAAAAAGGCGTTAGAGGTAACAAAAGAGCTTGGCGGCGAAAACTATGTGTTCTG GGGCGGAAGAGAAGGTTATGAGACGCTTTTGAACACCGACATGGAGCTTGAGCTTGACAACTTGGCAAGATTTTTGCGCA TGGCAGTTGACTATGCAAAAGAGATAGGGTTTGACGGTCAGTTTTTGATTGAACCAAAGCCAAAAGAACCAACTAAGCAT CAGTACGATTTTGATGCTGCTCATGTATATGGATTTTTGAAAAAGTATGATCTTGATAAGTACTTCAAGCTCAACATAGA AGTAAACCATGCAACCTTGGCAGGACATGATTTTCACCATGAGTTGAGATTTGCACGAATAAACAACATGCTTGGTTCAA TTGATGCTAACATGGGCGATTTGCTTTTGGGTTGGGATACAGATCAGTTCCCAACAGATGTAAGGCTTACCACGCTTGCT ATGTATGAGGTTATAAAGATGGGTGGTTTTGACAAAGGTGGGCTCAACTTTGATGCAAAGGTAAGAAGAAGCTCTTTTGA ACTTGAAGACCTGGTTATTGGTCACATTGCGGGGATGGATGCTTTTGCAAAAGGATTTAAGATAGCATATAAGCTTGTTA AAGATGGGGTATTTGATAAGTTTATCGAAGAGAGATACAGAAGCTACAAAGAAGGAATTGGAGCTAAGATTGTAAGTGGT CAGGCAGATTTTAAGACGTTAGAAGAGTATGCTCTAAATCTTTCTCAAATAGAAAACAAATCTGGCAAACAAGAGCTTCT TGAGATGATTTTGAACAAATATATGTTCAGTCAATGA Protein sequence : MKYFKDIPEVKYEGPKSDNPFAFKYYNPDEIIDGKPLKDHLRFAVAYWHTFCATGSDPFGQPTITRPWDRFSNPMDNAKA RVEAAFEFFEKLNVPFFCFHDRDIAPEGENLRETNKNLDEIVSMIKEYLNTSKTKVLWGTANLFSHPRYVHGAATSCNAD VFAYAAAQVKKALEVTKELGGENYVFWGGREGYETLLNTDMELELDNLARFLRMAVDYAKEIGFDGQFLIEPKPKEPTKH QYDFDAAHVYGFLKKYDLDKYFKLNIEVNHATLAGHDFHHELRFARINNMLGSIDANMGDLLLGWDTDQFPTDVRLTTLA MYEVIKMGGFDKGGLNFDAKVRRSSFELEDLVIGHIAGMDAFAKGFKIAYKLVKDGVFDKFIEERYRSYKEGIGAKIVSG QADFKTLEEYALNLSQIENKSGKQELLEMILNKYMFSQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 2e-116 | 60 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-116 | 60 |
