Gene Information

Name : COB47_0280 (COB47_0280)
Accession : YP_003839613.1
Strain : Caldicellulosiruptor obsidiansis OB47
Genome accession: NC_014392
Putative virulence/resistance : Resistance
Product : regulatory protein ArsR
Function : -
COG functional category : K : Transcription
COG ID : COG0640
EC number : -
Position : 337871 - 338248 bp
Length : 378 bp
Strand : -
Note : KEGG: ate:Athe_0315 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR

DNA sequence : 
TTGGAAAAACAGGATGGTTTTGAAAAAATCGATTTGTGTAGCTGTAATGTAATTCACAATGACATTGTTAAGAAGGTTAA
AGAAAGCCTTCCTGCCGAAGAGACAATATTTGACCTTGCCGAATTTTTTAAGGTTTTTTCAGACTCAACGCGCATAAAAA
TCTTAAGCAGTCTCTTGGTTTCTGAGATGTGTGTATGTGACTTAGCAGCAGTGTTGGGCACATCTCAGTCGGCAATATCT
CACCAGCTAAGGCTACTAAAAGTCTTCAGGTTAGTAAAGAGTAGAAAAGCTGGTAAAGTTGTGTATTATTCTCTTTTGGA
TGATCATGTAAAAAGTATAATTGAGCTTGGTCTTGCGCATCTTAGCGAAAACCAGTAG

Protein sequence : 
MEKQDGFEKIDLCSCNVIHNDIVKKVKESLPAEETIFDLAEFFKVFSDSTRIKILSSLLVSEMCVCDLAAVLGTSQSAIS
HQLRLLKVFRLVKSRKAGKVVYYSLLDDHVKSIIELGLAHLSENQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB47608.1 cadmium resistance protein C Not tested Type-III SCCmec Protein 4e-19 45
cadC BAC57488.1 Cadmium efflux system accessory protein homolog, cadmium resistance protein C Not tested Type-IIIinv SCCmec Protein 4e-19 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
COB47_0280 YP_003839613.1 regulatory protein ArsR BAC0366 Protein 2e-15 45
COB47_0280 YP_003839613.1 regulatory protein ArsR BAC0456 Protein 1e-20 41