|
Name : COB47_0239 (COB47_0239) Accession : YP_003839579.1 Strain : Caldicellulosiruptor obsidiansis OB47 Genome accession: NC_014392 Putative virulence/resistance : Unknown Product : S-adenosylmethionine/tRNA-ribosyltransferase- isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 294214 - 295254 bp Length : 1041 bp Strand : + Note : KEGG: ate:Athe_0245 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein DNA sequence : ATGAGAAAATGGAAACTCAGCGACTTTCACTATGACCTACCAGATGAGCTGATTGCACAAAAACCTGTAGAGCCACGGGA TAACTCAAGACTTATGGTTATTTTGCCAGACGGTACAATCGAGCACAGAATTTTCCGCGATATAGTTGAATACTTAAATG AAGGTGACTGTCTTGTTCTCAACAACTCAAAGGTCATACCTGCACGCTTGATTGGGCAGAGGGAAGACACTGGCAGTTTT ATAGAGTTTTTACTTGTAAAAAGGCTTGACATAAACACATGGGAGGTCATGACACGGCCGGGCAAAAAAGCGCGAAGAGG AAGAAAATTTGTATTTGGCAATGGAGAGCTTAAAGCCGAGGTTTTGCATGTAAATCAAGATGAAGGTACTAGAATTGTAA GGTTCTATTATGAAGGGGTGTTTGAAGAGGTTTTAGAAAAGCTGGGCAAGATTCCTCTTCCACCATATATAAAAGAAGAG CTTGAGGACTTATCAAGGTATCAGACAGTGTATAGCAAAGTGCCTGGTTCTGCTGCAGCACCGACTGCAGGTCTTCACTT TACAGAAGAGCTGCTTGAAAAAATTTCAAAAAAGGGTGTTGAGATTTTGTATGTGACACTGCACGTTGGGCTTGGAACTT TTAAGCCTGTTAAGGTTGAAAATGTGGAAGAGCACAAGATGCATGAGGAGTACTATGAGATTTCTCAGGATGTTGCAGAC AGAATAAATAGAGCAAAAGAGCTTGGAAAAAGAGTCATTGCGGTTGGAACGACATCGTGCAGAGTTTTAGAGTCGTGCAG CGATGAAGCAGGAAGAGTAAAAGCACAGAAAGGCTGGACTAATATCTTCATCTATCCCGGGTATAACTTTAAAGTGCTTG ACGGGCTTGTGACAAACTTTCATCTTCCAGATACAACCTTGATGATGCTTGTGTGTGCATTTGGTGGGTATGAAAGAATC ATGAATGCATACAAGATTGCAGTTGACATGCGATACAGGTTCTTCAGTTTTGGAGATGCAATGCTAATATTGAGAAGATG A Protein sequence : MRKWKLSDFHYDLPDELIAQKPVEPRDNSRLMVILPDGTIEHRIFRDIVEYLNEGDCLVLNNSKVIPARLIGQREDTGSF IEFLLVKRLDINTWEVMTRPGKKARRGRKFVFGNGELKAEVLHVNQDEGTRIVRFYYEGVFEEVLEKLGKIPLPPYIKEE LEDLSRYQTVYSKVPGSAAAPTAGLHFTEELLEKISKKGVEILYVTLHVGLGTFKPVKVENVEEHKMHEEYYEISQDVAD RINRAKELGKRVIAVGTTSCRVLESCSDEAGRVKAQKGWTNIFIYPGYNFKVLDGLVTNFHLPDTTLMMLVCAFGGYERI MNAYKIAVDMRYRFFSFGDAMLILRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 5e-70 | 49 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 7e-66 | 48 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 5e-66 | 48 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 4e-66 | 48 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 3e-66 | 48 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 2e-67 | 48 |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 7e-71 | 48 |
