Gene Information

Name : COB47_2002 (COB47_2002)
Accession : YP_003841251.1
Strain : Caldicellulosiruptor obsidiansis OB47
Genome accession: NC_014392
Putative virulence/resistance : Unknown
Product : class II aldolase/adducin family protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 2153908 - 2154552 bp
Length : 645 bp
Strand : -
Note : PFAM: class II aldolase/adducin family protein; KEGG: csc:Csac_0723 L-ribulose-5-phosphate 4-epimerase

DNA sequence :
ATGCTTGAGAGTTTAAAAGAGCTTGTTTGCAAATACAATCTTTATCTTCCAAAATTTGGCCTTGTTACATGGACATCTGG
GAATGTCTCGGCGCGTGACCCTGAGACAAACCTTGTGGTCATAAAACCATCCGGTGTTATGTACGACGAACTGACACCTG
ATAAGATGGTTGTGGTTGACATGGACGGGAACGTTGTTGAAGGAAGTTTAAAGCCATCAACAGACACTCTCACACATCTT
TATGTATACAAACACATGCCACACATAAATGCTGTTGTCCATACACATTCTAACTATGCAACAGCATTTGCAGCGCTTGG
CCAGCCAATAAAAGTGTATTTGACAGCAATTGCTGATGAGTTTGGCTGTGAGATTCCTTGCGGACCATACGCTCAAATTG
GTGGTGAAGACATTGGCAAGGTGATAGTTGAGTATATAGGTTCAAGCCCTGCAATTCTTCTTCAAAACCATGGAGTATTT
ACAATAGGAAGGAATGTTGATGAGGCAGTCAAGGCTGCTGTGATGGTTGAAGATGTAGCAAAAACTGTATTTATTGCAAA
GATGATGGGAGAGCCTATAGAAATTCCACCTGAAGAGGTAAAAAGAGCGCACGAAAGGTATATGACAAAGTATGGACAAA
AGTAA

Protein sequence :
MLESLKELVCKYNLYLPKFGLVTWTSGNVSARDPETNLVVIKPSGVMYDELTPDKMVVVDMDGNVVEGSLKPSTDTLTHL
YVYKHMPHINAVVHTHSNYATAFAALGQPIKVYLTAIADEFGCEIPCGPYAQIGGEDIGKVIVEYIGSSPAILLQNHGVF
TIGRNVDEAVKAAVMVEDVAKTVFIAKMMGEPIEIPPEEVKRAHERYMTKYGQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 9e-25 44