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Name : COB47_1881 (COB47_1881) Accession : YP_003841136.1 Strain : Caldicellulosiruptor obsidiansis OB47 Genome accession: NC_014392 Putative virulence/resistance : Unknown Product : preprotein translocase subunit SecA Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0653 EC number : - Position : 2034391 - 2036937 bp Length : 2547 bp Strand : - Note : KEGG: ate:Athe_2104 preprotein translocase, SecA subunit; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; helicase domain protein; SecA Wing and Scaffold; SEC-C motif domain protein DNA sequence : ATGTTAAAGATAATCGAAAAACTTATAGGTAGTTACAGTGAAAGAGAAATTAAGAAGATCTTGCCGATAATTGACAAGAT AGAATCACTTGCACCTGAATATGAAAAATTAACAGATGCAGAACTGAGACAAAAGACAGATATATTTAAACAGAGGTTAC AAAATGGAGAAACATTAGACGATATCCTGCCAGAAGCATTTGCTGCTGTTCGAGAAGCTGCATGGAGAACTTTGAAAATG CGTCATTTCAGAGTTCAGTTAATTGGTGGTGTGGTTTTGCATCAAGGTAGGATTGCAGAGATGAAAACTGGTGAAGGTAA GACCCTTGTGGCAACTCTGCCTGCGTACTTGAACGCTTTGGAGGGCAAGGGTGTTCATATAGTAACGGTCAACGATTATC TTGCCAGAAGAGATGCTGAGTGGATGGGACCTATTTACAATTTTCTGGGACTTTCTGTTGGTGTTATAGTACATGGATTG ACACATGAAGAGAGGAAAAAGGCTTATCACTGTGATATTACCTATGGGACAAACAATGAGTTTGGTTTTGACTACTTGCG CGATAACATGGCAATTTACAAAGAAGAGCTTGTACAAAGAGAGCTGAACTATGCAATAATAGATGAGGTTGACTCAATCT TGATTGATGAGGCAAGAACGCCTCTTATTATCTCAGGTCCTGCTGAGAAATCAACAGACCTTTACAAAAGAGCAGACAAT TTTGTAAGAAGACTAAAACCTCTTTATTATAACAGTGATGATGACAAGCAGATGCCAGATACAACTGGCTATGACTATAT AGTAAACGAGAAAAGACACACAGTTTCGCTCACAGAAGAGGGTATCAAGAAAGCTGAGAAATATTTTGGTGTAGGTAACT TAGCAGACCCGGAAAACGCAACACTTCATCATCACATTATTCAGGCACTTAAAGCTCACGCTCTTATGAAAAGAGATAGA GACTATGTTGTAAAAGATGGGCAGGTAATAATTGTTGATGAGTTTACTGGGAGACTTATGTACGGGCGAAGGTTTTCAGA AGGACTTCATCAGGCAATAGAGGCAAAAGAGGGCGTAAGAATTGAGAGAGAAAGCAAAACTCTGGCAACAATAACTTTTC AGAACTATTTCAGATTGTACAAAAAACTTGCTGGTATGACAGGTACTGCAAAAACTGAAGAGCAGGAGTTCAGAGAGATC TACAAGCTTGATGTCATAGAAATTCCTACACACAAGCCAATGATTAGAATTGATCACCCGGATAAGGTTTACAAGACAGA AAAAGCCAAGTTTGATGCAATTGTTCAGGAAATTGTTGAAACTCACAAAAAAGGGCAGCCTGTTTTGGTTGGCACAGTGT CAATTGAGAAGTCTGAGATGCTGAGCGAGATGCTCAAAAAACATGGCATAAAACATGAGGTTTTAAACGCAAAACACCAC GAAAAAGAGGCTATGATAATTGCAAAGGCTGGTCAAAAAGGTGCTGTTACAATAGCAACTAACATGGCTGGCCGTGGAAC AGACATTGTTTTAGGCGAGGGTGTTGCTGAGCTTGGCGGACTGAAAGTAATTGGTACAGAGAGGCATGAGAGCAGGCGAA TAGACAACCAGCTTCGAGGAAGAGCCGGTCGTCAGGGTGACCCGGGTGAATCAAGATTTTATGTGTCGCTTGAGGACGAT TTAATGAGGCTTTTTGGGTCTGAGAGGATCAAAAATCTTGTTGAGTCGCTGGGACTTCCTGATGACCAGCCAATTGAACA CAAGCTCTTGTCTGATGCCATTGAAAAGGCACAAAAGAGGGTTGAAGCGCGAAACTTTGAAATACGCAAACACCTTTTGC AGTTTGACGATGTTTTGAACAAGCAAAGAGAAATAATTTACTCACAAAGGCGCAAGGTTTTAGAAGGCGAAAACTTGAGA GATTCTATCCTTGGCATGATAGATGAGCTTGTTGACTACAAGATAAAGGTGTACACAGGTGAAAGTCCTCATCCTGAAGA CTGGGATATAAAAGGTCTTTTGCAGGATTTGAAGTTTATATTCTTGGATAGTGAACTTTCTGAGCAGGATGCAAAAAATA TGACAAAACAGGAGCTAAAAGAAAAGCTCATCTCAATTGCAAAAGAAAAATATGAGAAGAAAGAACAAGAAGTTGGCGAG CTTATGCGCGAGCTTGAAAGGGTTGTGCTTTTGCGAGTTGTTGACATGCACTGGATGGAACACATAGATGCAGTAGAACA GCTGAGAGAAGGCATATCTCTTCGCGCGATTGGTCAAAAAGACCCAGTAGTTGAGTTCAGGTTCGAAGCGTTTGAGATGT TTGATGAAATGATAAAGAGAATACAAGAAGATACAATAAAGATTATACTTCATGCAAATGTTGAGAACATGCCACAGAGA GAAAGAGTAGCAAAAGAGATGTATGAAAATGCTCCATCAGATACACCTGTGAGAAAACCTGTTGTAAAAACACAAAAAGT TGGAAGAAACGACCCGTGTCCTTGTGGCAGCGGCAAAAAATACAAAAAATGTTGCGGTGCAGTTTGA Protein sequence : MLKIIEKLIGSYSEREIKKILPIIDKIESLAPEYEKLTDAELRQKTDIFKQRLQNGETLDDILPEAFAAVREAAWRTLKM RHFRVQLIGGVVLHQGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLARRDAEWMGPIYNFLGLSVGVIVHGL THEERKKAYHCDITYGTNNEFGFDYLRDNMAIYKEELVQRELNYAIIDEVDSILIDEARTPLIISGPAEKSTDLYKRADN FVRRLKPLYYNSDDDKQMPDTTGYDYIVNEKRHTVSLTEEGIKKAEKYFGVGNLADPENATLHHHIIQALKAHALMKRDR DYVVKDGQVIIVDEFTGRLMYGRRFSEGLHQAIEAKEGVRIERESKTLATITFQNYFRLYKKLAGMTGTAKTEEQEFREI YKLDVIEIPTHKPMIRIDHPDKVYKTEKAKFDAIVQEIVETHKKGQPVLVGTVSIEKSEMLSEMLKKHGIKHEVLNAKHH EKEAMIIAKAGQKGAVTIATNMAGRGTDIVLGEGVAELGGLKVIGTERHESRRIDNQLRGRAGRQGDPGESRFYVSLEDD LMRLFGSERIKNLVESLGLPDDQPIEHKLLSDAIEKAQKRVEARNFEIRKHLLQFDDVLNKQREIIYSQRRKVLEGENLR DSILGMIDELVDYKIKVYTGESPHPEDWDIKGLLQDLKFIFLDSELSEQDAKNMTKQELKEKLISIAKEKYEKKEQEVGE LMRELERVVLLRVVDMHWMEHIDAVEQLREGISLRAIGQKDPVVEFRFEAFEMFDEMIKRIQEDTIKIILHANVENMPQR ERVAKEMYENAPSDTPVRKPVVKTQKVGRNDPCPCGSGKKYKKCCGAV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secA2 | YP_006310687.1 | preprotein translocase subunit SecA2 | Not tested | FWisland_3 | Protein | 3e-126 | 43 |
