Gene Information

Name : COB47_1741 (COB47_1741)
Accession : YP_003841005.1
Strain : Caldicellulosiruptor obsidiansis OB47
Genome accession: NC_014392
Putative virulence/resistance : Resistance
Product : protein-tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 1875521 - 1875937 bp
Length : 417 bp
Strand : +
Note : KEGG: ate:Athe_1932 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight

DNA sequence : 
ATGAAACCAAGAGTTGCTTTTGTTTGTGTTGGTAATTCATGTCGAAGCCAGATGGCAGAAGGTTTTGCAAAACACTACGG
CAAAGATTTGATTGAAGTGTACAGTGCAGGAACAGATATTGCAAAGGAGGTAAATCCTCTTGCCATTGAAGTCATGAGAG
AGGTTGGAATTGATATATCTTCACATTTTCCAAAGACAATATTTGATATTCCAAAAGAAGTTGATTTTTTAATCACTATG
GGTTGTGGTGTTGAATGTCCATTTATCCCATGTAAGGTAAAAGAGGATTGGGGACTACCTGACCCTGTAGAAAAACCTAT
TGAAGAATTTAGAAAAGTAAGAGACGAGATAGAAAAAAAGGTCTTAGAGCTTATTATTGAAAGAATTAAAAAAGAATACT
ATAGGGAGGGAAAATAA

Protein sequence : 
MKPRVAFVCVGNSCRSQMAEGFAKHYGKDLIEVYSAGTDIAKEVNPLAIEVMREVGIDISSHFPKTIFDIPKEVDFLITM
GCGVECPFIPCKVKEDWGLPDPVEKPIEEFRKVRDEIEKKVLELIIERIKKEYYREGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC YP_005754064.1 arsenate reductase Not tested Type-XI SCCmec Protein 2e-17 50
arsC YP_252023.1 arsenate reductase Not tested SCCmec Protein 3e-17 50
arsC YP_252016.1 arsenate reductase Not tested SCCmec Protein 1e-15 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
COB47_1741 YP_003841005.1 protein-tyrosine phosphatase BAC0032 Protein 5e-17 49
COB47_1741 YP_003841005.1 protein-tyrosine phosphatase BAC0580 Protein 2e-17 48
COB47_1741 YP_003841005.1 protein-tyrosine phosphatase BAC0586 Protein 1e-13 47
COB47_1741 YP_003841005.1 protein-tyrosine phosphatase BAC0581 Protein 2e-14 47