Gene Information

Name : COB47_1717 (COB47_1717)
Accession : YP_003840982.1
Strain : Caldicellulosiruptor obsidiansis OB47
Genome accession: NC_014392
Putative virulence/resistance : Unknown
Product : pyridoxine biosynthesis protein
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 1847830 - 1848720 bp
Length : 891 bp
Strand : -
Note : KEGG: ate:Athe_1909 pyridoxine biosynthesis protein; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; Indole-3-glycerol phosphate synthase

DNA sequence : 
ATGAGCGAGATTGTAAATGAAAGATATGAACTTAACAAAAGCCTTGCACAGATGTTAAAAGGCGGTGTCATCATGGATGT
GACATCTCCAAAAGAGGCTGAGATTGCTGAAAAAGCAGGTGCTGTTGCTGTTATGGCTCTTCAAAAAGTTCCGGCAGACC
TTAGAAAAGAAGGCAAGGTTGCGAGGATGGCTGACCCGAAAATAATATTGGAAATTAAAAGTGCTGTTTCAATACCTGTT
ATGGCAAAGGTAAGAATCGGACATTTTGTTGAAGCTCAAATTTTAGAAGCACTTGGCATAGACTATATTGATGAAAGCGA
GGTCTTGACACCTGCTGATGAGGAGCATCACATTGATAAGTGGAAGTTCAAAGCTGCGTTCGTGTGTGGCGTAAGAGATT
TGGGTGAGGCTTTGAGAAGAATTCAAGAAGGTGCTTCCATGATAAGAACAAAAGGTGAGGCTGGGACAGGAAATGTTGTT
GAAGCGGTAAGACACCTTCGCAGAATAAACAAGCAAATTAGTTATGCTGCATCATTAAGTGACGATGAGCTTTATGCATA
TGCAAAGGAACTTGGAGTATCATATGAACTTTTGAAAAAAACAGCCGAGCTCAAACGTCTTCCTGTTGTCAACTTTGCAG
CAGGCGGAATTGCAACACCGGCTGATGCAGCATTAATGATGCAGCTTGGAGCAGATGGTGTGTTTGTCGGTTCTGCTATT
TTCAAGAGCAAAAATCCTGAGAAAAGAGCAAGGGCAATTGTGATGGCAACCACATATTACAATGATCCCAAAATACTGGC
AGAAATATCATATGACCTTGGCGAAGAGATGGAAGGTATAGATTTGAGAAATCTTTCTGAGCATGAACTTTTGCAGTTTA
GGGGGAATTAA

Protein sequence : 
MSEIVNERYELNKSLAQMLKGGVIMDVTSPKEAEIAEKAGAVAVMALQKVPADLRKEGKVARMADPKIILEIKSAVSIPV
MAKVRIGHFVEAQILEALGIDYIDESEVLTPADEEHHIDKWKFKAAFVCGVRDLGEALRRIQEGASMIRTKGEAGTGNVV
EAVRHLRRINKQISYAASLSDDELYAYAKELGVSYELLKKTAELKRLPVVNFAAGGIATPADAALMMQLGADGVFVGSAI
FKSKNPEKRARAIVMATTYYNDPKILAEISYDLGEEMEGIDLRNLSEHELLQFRGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-77 63
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 2e-77 63
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-77 62