Gene Information

Name : COB47_1658 (COB47_1658)
Accession : YP_003840927.1
Strain : Caldicellulosiruptor obsidiansis OB47
Genome accession: NC_014392
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 1769803 - 1770567 bp
Length : 765 bp
Strand : -
Note : KEGG: ate:Athe_2292 IstB domain protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase

DNA sequence :
ATGAGCAATTATGTGAAACTACTTAACAACTTAGAAGAGTTAGGACTTCACAACATAAAGAATAATCTTGACAAATACTT
AGATTTAGTGGCAAGCGGAGAAAAAAGTATGACAGATGCATTGTATGAACTTAGTAACTTAGAGATAAAAGCAAAAGAAG
AAAGAGCTATATTAGGATGTGTGAGGGTGGCAAATTTCCCATTTATAAAAGGCATAGAAGATTTTGATTTTTCATTTCAG
CCAAGTATAAACAAGCAACAAATAATGGATTTAATGAGTTTAAGATTTTTAGAAGGGAATGAAAATATACTGTTTGTAGG
AACACCAGGAGTAGGGAAAACGCATTTAGCCACAGCAATAGGAATAGAGTGTGCAAAACGGAGGTATTCCACATATTTCA
TACATTTTCAAGAATTAATAGCCCAGCTAAAAAAGGCACTGTTGGAGAACAGATTAGAATACAGGCTTAAGCATTTTTCA
AAATATAGAATTTTAATAATAGACGAGATAGGTTATTTGCCTATAGATAATGATGGAGCGAATTTATTTTTTCAACTTAT
ATCGAGCAGATATGAGAAGAGCAGCACAATAATAATAACTAATGTTGTATTTTCAGAGTGGGGAGAAATATTTGGTGGAG
CGACGATAGCAAATGCAATTTTAGACAGGCTACTCCATCATTCTTTCGTGATTTTCATAAAAGGACCTTCATACAGATTG
CAGTCAAAAACAGCATATTTTAGCAACACAAACCAGCAAAGCTAA

Protein sequence :
MSNYVKLLNNLEELGLHNIKNNLDKYLDLVASGEKSMTDALYELSNLEIKAKEERAILGCVRVANFPFIKGIEDFDFSFQ
PSINKQQIMDLMSLRFLEGNENILFVGTPGVGKTHLATAIGIECAKRRYSTYFIHFQELIAQLKKALLENRLEYRLKHFS
KYRILIIDEIGYLPIDNDGANLFFQLISSRYEKSSTIIITNVVFSEWGEIFGGATIANAILDRLLHHSFVIFIKGPSYRL
QSKTAYFSNTNQQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-37 46
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 5e-34 45
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 1e-36 45
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 1e-36 45
api84 CAF28558.1 putative transposase Not tested YAPI Protein 1e-36 45
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-36 45
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 1e-36 45
unnamed CAA21402.1 - Not tested HPI Protein 2e-36 45
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 1e-36 45
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 1e-36 45
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 2e-36 45
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 2e-36 45
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 1e-36 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
COB47_1658 YP_003840927.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 1e-37 46
COB47_1658 YP_003840927.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 3e-34 45
COB47_1658 YP_003840927.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 7e-37 45
COB47_1658 YP_003840927.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 7e-37 45
COB47_1658 YP_003840927.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 7e-37 45