Gene Information

Name : COB47_1588 (COB47_1588)
Accession : YP_003840857.1
Strain : Caldicellulosiruptor obsidiansis OB47
Genome accession: NC_014392
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : -
Position : 1694539 - 1695864 bp
Length : 1326 bp
Strand : -
Note : KEGG: ate:Athe_1775 pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like; Pyrimidine nucleoside phosphorylase domain

DNA sequence :
GTGCTGGTGACAGAGATTATTAGGAAAAAAAGAGATGGAGATATCTTAAACAAAGAAGAACTTGAATTTATTGTAAACGG
GTTTGTAAAAGGTGAAATTCCAGACTATCAGATGTCTGCTTTCTTGATGGCTATATATTTTAGAGGGATGTCAAAAGAAG
AGCTTGTAGCACTTACCATGCTCATGGCAAAATCAGGCAAGATGGTAGACCTGAGCAGTATAGATGGTATCAAGGTTGAC
AAACACTCAAGTGGTGGTATTGCTGACACAACCACCTTGGTTTTAATACCACTGGCAGCATCTTGCGGTGTAAAGGTTGC
AAAGATGTCAGGACGAGGGCTTTCTCACACAGGTGGGACAATTGACAAGTTGGAGTCAATCCCAGGTTTTAAAACTGAGC
TTTCAGAAGATGAGTTTATAGAAGCTGTAAATAAAGTTGGTGCAGCAATTGTTGGGCAGTCAGAAAGCCTTGTTCCTGCA
GACAAAAAGATATATGCTTTGAGAGATGTCACAGCTACAGTTGAATCTATACCACTTATTGCATCTTCTATCATGAGCAA
AAAGATTGCAGCTGGGAGCGACAAAATAATACTTGATGTCAAGTTTGGCAAAGGTGCTTTCATGAAAGAGTATGAAAAGG
CAAAAGAGCTTGCTAATACTATGGTTGAGATTGGAACTTTGGCAGGAAGAGAAACCATCGCTTATGTTACAGATATGAAC
CAGCCGCTTGGCCTTATGATTGGCAACGCTCTTGAGGTTATTGAAGCAATAGAAGTTTTGAAAGGCAGAGGACATGAAGA
TTTGAAGAATCTCTGTATTGAATTTGCATCTGAGATGATAATTATGGCTGGAGTTGAAAAGGAGAAAAAATTAGCACAAG
AAAGAGCAATTGAGAGCATTGAAAAAGGACATGCTCTTGAAAAGTTTAAAGAAATTATAAAAAACCAAGGTGGAAACCCT
GAAATAGTTGACAATTATTCTTTGCTGCCACAAGCCAAATATACTTATGAACTAAAATGCGATGAAGATATGTATATAAA
AGATATTGATGCACTCAAACTTGGACTTTGCGCATTAAAACTTGGAGCAGGAAGACAAAGAAAAGAAGACAAAATTGACT
ATGCGGTTGGAATTCAACTTTTTGGTAAAATAGGAGATAAAATAGCCAAGAATATGCCATATGCTAAAATCTATGCAAAT
GATGAAAAAAGGCTTGAAGAAGCCATCTCAGATGTGAAAACTGCATTTGAGTTTTCTAAGAGGCCTGTTCCAAAAAGAAA
AGTAATATTTGCAAAGATAACAAAAGACAATGTTTTTGAATTTTAA

Protein sequence :
MLVTEIIRKKRDGDILNKEELEFIVNGFVKGEIPDYQMSAFLMAIYFRGMSKEELVALTMLMAKSGKMVDLSSIDGIKVD
KHSSGGIADTTTLVLIPLAASCGVKVAKMSGRGLSHTGGTIDKLESIPGFKTELSEDEFIEAVNKVGAAIVGQSESLVPA
DKKIYALRDVTATVESIPLIASSIMSKKIAAGSDKIILDVKFGKGAFMKEYEKAKELANTMVEIGTLAGRETIAYVTDMN
QPLGLMIGNALEVIEAIEVLKGRGHEDLKNLCIEFASEMIIMAGVEKEKKLAQERAIESIEKGHALEKFKEIIKNQGGNP
EIVDNYSLLPQAKYTYELKCDEDMYIKDIDALKLGLCALKLGAGRQRKEDKIDYAVGIQLFGKIGDKIAKNMPYAKIYAN
DEKRLEEAISDVKTAFEFSKRPVPKRKVIFAKITKDNVFEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 2e-81 43