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Name : COB47_0156 (COB47_0156) Accession : YP_003839506.1 Strain : Caldicellulosiruptor obsidiansis OB47 Genome accession: NC_014392 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : - Position : 201406 - 203082 bp Length : 1677 bp Strand : - Note : KEGG: ate:Athe_0165 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain DNA sequence : ATGGACTTGCACAAAAAGTGGTGGAAGGAAGCTGTTGTATATCAAATCTATCCTCGAAGCTTTTATGACTCAAACGGTGA TGGAATTGGAGATTTGCCAGGAATAATAGAAAAACTTGATTATCTACAAGAGCTTGGAGTAGACGTTATCTGGCTCAACC CTATTTACAAATCTCCAAACGCAGACAATGGTTATGACATCAGCGATTACTATGACATCATGGATGAGTTTGGTACAATG GAAGATTTTGATAGATTATTGAATGAAGCCCACAAAAGAGGAATTAAAATTGTAATGGACCTTGTTGTAAACCATACATC TGACGAGCACAAATGGTTTTTGGAGTCAAGAAAATCAAAAGACAGTCCTTACAGAAACTTTTATTTCTGGCGACCGGGGA AAAACGGTAAACCTCCTAACAACTGGACATCCTTTTTTGGTGGCCCTGCGTGGGAGTATGACTCACAGACTGGAGAGTAC TACCTACATCTTTTTGCAACAAAGCAACCAGACCTGAACTGGGACAATCCTCAGGTCCGTCAGGAAGTTTATAAAATGAT GAAGTGGTGGCTTGACAAGGGTATAGACGGTTTTAGAATGGATGTGATAAATCTTATCTCCAAGGTGGAAGGACTACCAG ACGATAGAGAAGGAGAAAAAAAAGGAGGACTTGTTGGTTTCAAATACTATGCAAATGGTCCGCGCGTTCATGAATACCTT CAGGAGATGAACAGAGAAGTCCTGAGCAAATACGACATCATGACAGTAGGTGAGACTCCATTTGTAACTCCTGAGATTGC AAAGCTGTATGTGGAGTATGACAGAAATGAGCTTAATATGCTCTTTCATTTTGAACATATGGACATGGACTGTGAAGGCA GCAAATGGAATGTAAAATGCTGGAAATTAACTGATTTGAAAAAAATAATGTACAAGTGGTATTTGGCATTGAAAGACAAG GGCTGGAATTCGCTTTACCTTAACAACCATGACCAGCCAAGGATGGTCTCACGTTTTGGCAATGATAAAGAATACAGGGT TGAGTCTGCTAAGCTTTTGGCGACTTTGCTTCACACATGGCAGGGAACTCCTTATATCTACCAAGGCGAAGAGATTGGCA TGACAAACTGCAAGTTTAAAAGTATTGATGAGTTCAGAGACATTGAAACACTTAACTTTTACCGTGAAATGAAGGAAAAA GGCATATCAGATGATAGCATTTTAGAAATCCTGAACAAAAGAAGCAGAGACCATGCAAGAACTCCAATGCAATGGGACGA CTCAGAAAACGCGGGGTTTACAACAGGAAAGCCGTGGATAAAGGTAAATCCAAATTACAAAGAAATAAATGTAAAGAAAG CTCTTGCTGACAAAGATTCTATCTTTTACTACTACAAAAAACTTATCCAGCTAAGAAAAACACATCCGGCAGTTGTATAT GGTGATATTCAGATGCTTTATGAAAATGATGAAAAAATCTTTGCCTATACAAGAAGCTATGGAAATGAAAAACTTCTTGT TGTTATGAACTTTTCGGAAGAAGAAGTGGAATTTTGCGCACCAAAAGAAATATTCTTTAATAAGCCTGAGCTTTTAATCA GCAATTATGAGGTTGAAGATGATATTCAACAAAAAATTGTTTTAAAACCATGTGAATCGAGGGTATATAAAATATGA Protein sequence : MDLHKKWWKEAVVYQIYPRSFYDSNGDGIGDLPGIIEKLDYLQELGVDVIWLNPIYKSPNADNGYDISDYYDIMDEFGTM EDFDRLLNEAHKRGIKIVMDLVVNHTSDEHKWFLESRKSKDSPYRNFYFWRPGKNGKPPNNWTSFFGGPAWEYDSQTGEY YLHLFATKQPDLNWDNPQVRQEVYKMMKWWLDKGIDGFRMDVINLISKVEGLPDDREGEKKGGLVGFKYYANGPRVHEYL QEMNREVLSKYDIMTVGETPFVTPEIAKLYVEYDRNELNMLFHFEHMDMDCEGSKWNVKCWKLTDLKKIMYKWYLALKDK GWNSLYLNNHDQPRMVSRFGNDKEYRVESAKLLATLLHTWQGTPYIYQGEEIGMTNCKFKSIDEFRDIETLNFYREMKEK GISDDSILEILNKRSRDHARTPMQWDDSENAGFTTGKPWIKVNPNYKEINVKKALADKDSIFYYYKKLIQLRKTHPAVVY GDIQMLYENDEKIFAYTRSYGNEKLLVVMNFSEEEVEFCAPKEIFFNKPELLISNYEVEDDIQQKIVLKPCESRVYKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 6e-149 | 58 |
