Gene Information

Name : COB47_1376 (COB47_1376)
Accession : YP_003840652.1
Strain : Caldicellulosiruptor obsidiansis OB47
Genome accession: NC_014392
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 1495200 - 1495946 bp
Length : 747 bp
Strand : -
Note : KEGG: ate:Athe_1156 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR

DNA sequence :
ATGGAACTTTTGAAAGATAAAGTTGCGCTCATCACAGGCGCTTCAAGGGGAATTGGAAGAGCAATCGCTTTAAAGTTTGC
TCAAAACGGAGCAAATGTAATTATTAACTATTCGTCGAGTCAGTCCCAAGCCGAAAATTTAAAAGAAGAGATAGAGAAAA
TAGGAACAAAAGCAATGATAATAAAATGCGATGTTTCAAATTCTGATGAGGTAAATCAGATGTTTTCACAGATAGAAAAG
GAGTTTGGAAGGCTTGATATACTTGTTAACAATGCTGGAATTACAAAAGATGGACTAATTCTTAGAATGAATGAGGAAGA
CTTTGATAAGGTTATTGCAATAAATTTGAAAGGAGCGTTTTTGTGCGCAAAGGCAGCAGCTAAAATGATGGTAAAACAAC
GGTTTGGCAATATAATTAATATATCCTCTGTTGTAGGAATTACAGGCAATATTGGTCAGGCAAATTATGCAGCGTCCAAA
GCAGGAATAATAGGTCTTACAAAGTCTCTTGCAAAAGAACTTGCGTCCCGCAATATCAGAGTAAATGCAATAGCACCAGG
CTTTATTAAAACTGACATGACAGAGGTTTTGAGTGATAAGGTAAAAGAGACCATGCTTTCTTCCATCCCACTTGGTCGAT
TTGGCGAGGCTGATGAGGTTGCAAACGTGGCACTTTTTCTTGCCTCAAGCCTTTCATCCTATATTACTGGGCAAGTTATT
GTTGTTGACGGTGGGATGATTATGTAA

Protein sequence :
MELLKDKVALITGASRGIGRAIALKFAQNGANVIINYSSSQSQAENLKEEIEKIGTKAMIIKCDVSNSDEVNQMFSQIEK
EFGRLDILVNNAGITKDGLILRMNEEDFDKVIAINLKGAFLCAKAAAKMMVKQRFGNIINISSVVGITGNIGQANYAASK
AGIIGLTKSLAKELASRNIRVNAIAPGFIKTDMTEVLSDKVKETMLSSIPLGRFGEADEVANVALFLASSLSSYITGQVI
VVDGGMIM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 2e-40 43
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 1e-40 43
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 3e-40 43
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 3e-40 43
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 2e-41 42
VSAL_I1482 YP_002262921.1 glucose 1-dehydrogenase Not tested Not named Protein 5e-32 41
ORF SG27 AAN62249.1 putative short-chain type dehydrogenase / reductase Not tested PAGI-3(SG) Protein 8e-17 41