|
Name : COB47_1332 (COB47_1332) Accession : YP_003840610.1 Strain : Caldicellulosiruptor obsidiansis OB47 Genome accession: NC_014392 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 1450337 - 1452376 bp Length : 2040 bp Strand : - Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: ate:Athe_1224 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase doma DNA sequence : ATGAATGTTCTTGAAAAAGACATAAGATTCTTAAAAGGTGTTGGAGAAAACAGAGAAAGGCTATTTAAAAAGCTGGGTAT AAAAAAAGCCGAGGATTTGCTCTGGCACATACCCCGAAAATATCTTGATTATAGTAAGCTAAAGAAAATAAGAGAGCTTT GCAATGGTGAAATAGAGTCATTTGTTGCAAAAGTTGCTGGCAAGCCTGTGGAGATAGAGACAAAGTCAGTAAAGATAATA AAAATTCCTGTTGAAGATAGTACAGGCGTTGTTACAACAGTATGGTTTAACCAGGACTATATAAAAAACGTTTTGAAGGA AGGAGAGATATTCTGCTTTTCTGGGAAGATAGAGAGAAAAGGCTTTTATATTGAGGTCAAAAATCCCGAATTTGAGAAAT ATGACCAACATCTTCTTCATACAGGCAGGATTGTTCCTGTATACAATTCTACAGAAGGTCTTTCTCAAAAGGTGATTAGA AATATTGTGAACAATCTTCTGCAGCAAGTTGATGGAGCACTTATAGATATAATTCCGCCTTATATAAGGCAAAAATATAA TTTGAGTGAAATCAATTTTGCAATAAAAAATATTCATTTTCCAGAAAACAAATTGAGCTTAGAACTTGCAAGGAAAAGGC TTGTGTTTGAAGAATTTTATCTTCTTCAGCTTTCCCTTTTGCTTCTAAAAGAAAACATAGAAAAAAACGAAGGATTAAAA ATTGAAAATGCACAAAGTAGCTTAAAAGAGTTTGAAAAGCTTCTGCCGTTTGAGTTGACCGAGGCACAAAAAAGAGTGCT GGCAGAGATTGCACAGGATTTAGAGAGTACAAAACAGATGAACAGACTCATCCAAGGCGATGTTGGCTGCGGGAAAACGG TTGTAGCTTTGGCAAGCGCATATGCAACAATAAAAGCGGGATATCAGGTTGCACTGATGGCACCAACAGAGGTTTTAGCT TTGCAGCATTATAACGAATGTAAAAAGTATTTTGGGAATAAATTTAACGTAAGACTTTTGATTGGATCAACTCCAAAAAA AGAAAAAGAAATAATTTTAAAAGAGATTGAACATGGACTTTGCAAAATGGTCATTGGAACTCATGCTCTTATCCAAGATG AAGTAAAATTTAAAAACCTTGGCTTAGCAATCACTGATGAACAACACAGATTTGGAGTTATCCAAAGGGTAGAACTCACA AAAAAAGGAAGTTCGCCGAACATTCTTGTTATGACAGCAACTCCAATACCCAGAACTTTGAGTTTGGTTTTGTATGGAGA CCTTGATATTTCTATTATTGACCAGTTACCTCCCGGCAGAAAAAAGATTTTGACATACGCTGTTGATGAGAGTTTTCGCC AGCGGGTGTATAATTTTATAAAGAAACAGTTAGATGAAGGAAGGCAGGTTTACTGGATATGTCCTCTGATTGAAGAGTCA GAAACTTTGAATGCAAAATCAGCAGTTGAATTTGCGAAATCCTTAAAAGAAGGATTTTTTAAAGACTACAATATTGGGTG TCTGCACGGAAAACTTTCTGTAAAAGAGAGAGACAAAATCTTAAATGATTTTAAAGATGGATACATTCATATATTAGTTT CAACTACAGTTGTTGAGGTTGGAATAAACGTTCCAAATGCGACAGTAATGGTGATTGAGAATGCTGAAAGATTTGGACTT GCCCAGCTGCATCAGCTAAGGGGGCGAGTTGGCAGAGGCGAGCACCAGTCGTACTGTATTTTGTTTAATCAAAGCGATTC AGAAATTGCCAAAAAAAGGATGATAGCTATAACCAGAAGTCAGAACGGATTTGAAATTGCTGAAATGGATCTAAAACTTC GAGGACCTGGTGATTTGTTTGGGACAAAACAGCACGGTGTTATGAACTTTAAAGTAGCCGATATCATAAATGATATGGAT ATTTTAAAACAAGCGAGAATAGCTGCAGAAGAGACTATTAGACTCAATCTTGTTGATAACAAACTTTTAGAGAAAATCAA CAAACAATTTTACAATAATATAGAAAATATTGGCCTTTAA Protein sequence : MNVLEKDIRFLKGVGENRERLFKKLGIKKAEDLLWHIPRKYLDYSKLKKIRELCNGEIESFVAKVAGKPVEIETKSVKII KIPVEDSTGVVTTVWFNQDYIKNVLKEGEIFCFSGKIERKGFYIEVKNPEFEKYDQHLLHTGRIVPVYNSTEGLSQKVIR NIVNNLLQQVDGALIDIIPPYIRQKYNLSEINFAIKNIHFPENKLSLELARKRLVFEEFYLLQLSLLLLKENIEKNEGLK IENAQSSLKEFEKLLPFELTEAQKRVLAEIAQDLESTKQMNRLIQGDVGCGKTVVALASAYATIKAGYQVALMAPTEVLA LQHYNECKKYFGNKFNVRLLIGSTPKKEKEIILKEIEHGLCKMVIGTHALIQDEVKFKNLGLAITDEQHRFGVIQRVELT KKGSSPNILVMTATPIPRTLSLVLYGDLDISIIDQLPPGRKKILTYAVDESFRQRVYNFIKKQLDEGRQVYWICPLIEES ETLNAKSAVEFAKSLKEGFFKDYNIGCLHGKLSVKERDKILNDFKDGYIHILVSTTVVEVGINVPNATVMVIENAERFGL AQLHQLRGRVGRGEHQSYCILFNQSDSEIAKKRMIAITRSQNGFEIAEMDLKLRGPGDLFGTKQHGVMNFKVADIINDMD ILKQARIAAEETIRLNLVDNKLLEKINKQFYNNIENIGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 3e-76 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| COB47_1332 | YP_003840610.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 1e-88 | 41 |
