Gene Information

Name : COB47_1022 (COB47_1022)
Accession : YP_003840309.1
Strain : Caldicellulosiruptor obsidiansis OB47
Genome accession: NC_014392
Putative virulence/resistance : Unknown
Product : NusG antitermination factor
Function : -
COG functional category : K : Transcription
COG ID : COG0250
EC number : -
Position : 1137516 - 1138040 bp
Length : 525 bp
Strand : +
Note : TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: ate:Athe_1532 NusG antitermination factor; SMART: NGN domain-containing protein; KOW domain protein

DNA sequence :
ATGGGTGATAAAAGAGCAAAATGGTATGTTGTCCATACCTATGCAGGCTATGAAAATAAAGTAAAAGCCAATTTAGAAAA
AATAATTGAAAATAGAAATTTGTCTGATAGAATCTTAGACATTAGGATTCCCACTGAACTTGTCACTGAAATTAAAGATG
GAAAGAAAATTGTTAAAGAAAAAAAGAAGTTCCCGTCGTATGTGTTAATCAAAGCTGTAATGGACAATGAGATATGGTAC
ACGATAAGAAATGTCAGAGGCGTGACTGGTTTTGTGGGACCTGAATCTAAACCCACACCTCTTACAGATGAAGAAATAGA
AGCGATGGGTATAAAGGAAGAGGTTGTGGAGGTATTTGACATTGAAGTTGGTGACAATGTGAAGATTGTATCTGGTCCAT
TTACTGATTTTTATGGGCCAGTTGTTGAAATAAATAAAGAACGAAAAAAGGTAAGAGTAATGCTAAACCTATTTGGGAGA
GAAACTCCTGTGGAATTTGATTACCACCAGGTAGAAAGATTATGA

Protein sequence :
MGDKRAKWYVVHTYAGYENKVKANLEKIIENRNLSDRILDIRIPTELVTEIKDGKKIVKEKKKFPSYVLIKAVMDNEIWY
TIRNVRGVTGFVGPESKPTPLTDEEIEAMGIKEEVVEVFDIEVGDNVKIVSGPFTDFYGPVVEINKERKKVRVMLNLFGR
ETPVEFDYHQVERL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nusG YP_281502.1 transcription antitermination protein NusG Not tested Not named Protein 5e-27 46
nusG YP_006310753.1 transcription antitermination protein NusG Not tested FWisland_4 Protein 8e-28 43