Gene Information

Name : Micau_6069 (Micau_6069)
Accession : YP_003839141.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Unknown
Product : IstB domain-containing protein ATP-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 6782943 - 6783704 bp
Length : 762 bp
Strand : -
Note : KEGG: sco:SCO6394 IS element ATP binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase

DNA sequence :
GTGAGTGAGCTGGTCACCAACCGCATCCACGCCAGCGCCACCAAACTCGGCCTGCCTCACCTGGCCAAGACGCTGCGGGA
ACTCACCGGCCGGGCCGACACCGAGGCCATGGGCTACCTGGAGTTCCTCGACCTCGTCCTGGAAGAGGAACTCGCCGTCC
GCGACGAACGCCGCTTCCGCGCCGGGCTACGCCTGTCGAAGCTGCCGCACCACAAGACCCTCGACGACTACGACTTCAGC
TTCCAACCCGACCTGGACCCCCGTAAGGTCCGTGACCTCGCCACCCTCGCATTCGTGCAGGCCAAAGCCAACGTCGCTCT
CCTCGGCCCACCCGGCGTCGGCAAGACCCACATCGCGGTGTCCCTCGCGGTCGCCGCCTGCCGAGCCGGATTCACCGTCT
ACTTCACCACCCTCGACGACATGGTCCGCCACCTCACCGCCGCCGACGCGATCGGCCGGCTGGCCCGGAAGCTGCAGACC
TACCTACGCCCCACCGTCCTGGTCATCGACGAGGTGGGCTACCAGCCCCTCGAACGCCCCGAGGCCAACCTCGTCTTCCA
AGTCATCTCGAAACGCTACGAGAAGGGCTCCACCCTGCTGACCTCGAACAAAGGCTTCGGCGAATGGGGTCAAGTCTTCG
GCGACGAGGTCCTGGCCACCGCCATCCTCGACCGGCTCCTGCACCACTGCGACGTCGTCCCGATCAACGGCCCCAGCTAC
CGACTCAAGAACCGCCTCACCGCCATCGAGAACGTCGCCTGA

Protein sequence :
MSELVTNRIHASATKLGLPHLAKTLRELTGRADTEAMGYLEFLDLVLEEELAVRDERRFRAGLRLSKLPHHKTLDDYDFS
FQPDLDPRKVRDLATLAFVQAKANVALLGPPGVGKTHIAVSLAVAACRAGFTVYFTTLDDMVRHLTAADAIGRLARKLQT
YLRPTVLVIDEVGYQPLERPEANLVFQVISKRYEKGSTLLTSNKGFGEWGQVFGDEVLATAILDRLLHHCDVVPINGPSY
RLKNRLTAIENVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 4e-39 47
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 2e-41 47
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 2e-41 47
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 2e-41 47
unnamed CAA21402.1 - Not tested HPI Protein 2e-41 47
api84 CAF28558.1 putative transposase Not tested YAPI Protein 2e-41 47
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 2e-41 47
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-41 47
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 2e-41 47
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 2e-41 47
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 2e-41 47
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 2e-41 47
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 2e-41 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_6069 YP_003839141.1 IstB domain-containing protein ATP-binding protein VFG1460 Protein 2e-39 47
Micau_6069 YP_003839141.1 IstB domain-containing protein ATP-binding protein VFG1627 Protein 1e-41 47
Micau_6069 YP_003839141.1 IstB domain-containing protein ATP-binding protein VFG1606 Protein 1e-41 47
Micau_6069 YP_003839141.1 IstB domain-containing protein ATP-binding protein VFG1663 Protein 2e-41 47
Micau_6069 YP_003839141.1 IstB domain-containing protein ATP-binding protein VFG1515 Protein 1e-41 47