Gene Information

Name : Micau_6029 (Micau_6029)
Accession : YP_003839105.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 6742029 - 6744668 bp
Length : 2640 bp
Strand : -
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: sro:Sros_4026 ATPase AAA-2 domain protein; SMART: AAA ATPase

DNA sequence :
ATGGACCCCAACCGTCTGACCCAGAAGTCCCAGGAAGCGCTGCACGACGCGCAGACCAAGGCGCTGCGCTTCGGCCACGT
CGAGGTCGACGGCGAGCACCTGCTGCTCGCCCTGCTCGACCAACCCGACGGCCTCGCGCCGCGGCTGCTGGCCCAGGCCG
GCGCCGACCCCGACCAGCTGCGCAACAGCGTCGAAGGCGAGCTCGGCCGCCGCCCGCGCGTGTCCGGGCCGGGCGCGCAG
CCCGGCCAAGTGTTCGTCACCCAACGGCTGTCGCGGCTGCTCGACGCGGCAGACCGGGAAGCCAAGCGGCTCAAGGACGA
GTACGTCTCCGTCGAGCACCTGCTGCTCGCGCTGGTCGAGGAAGGCTCGTCCAGCGCCGCGGGGCGGGCGCTGAAGGACC
AGGGCCTGACCCGCGACCGGCTGCTGGGCGCGTTGACCGGGATCCGCGGCAACCAGCGGGTCACCTCCGCCAACCCCGAG
GTCGCCTACGAGGCGCTGGACAAGTACGGACGCGATCTGGTCGCCGACGCCCGCGCCGGCAAGCTGGACCCGGTGATCGG
CCGCGACGACGAGATCCGCCGGGTCGTGCAGATCCTGTCCCGCAAGACCAAGAACAACCCGGTCCTGATCGGTGACCCCG
GCGTCGGTAAGACCGCCATCGTCGAGGGCCTCGCGCAGCGCGTGGCCAACGGCGACGTCCCGGAGGGCCTGCGCGACAAG
ACCGTCTTCTCCCTCGACATGGGCTCGCTGGTCGCGGGGGCGAAGTACCGCGGTGAGTTCGAGGAGCGCCTCAAGGCCGT
GTTGTCCGAGGTGAAGGCTGCCGAGGGACGGATCCTGCTGTTCGTCGACGAGCTGCACACCGTGGTCGGCGCGGGCGGGG
GCTCCGAGGGAGCGATGGACGCCGGGAACATGCTCAAGCCGATGCTGGCCCGCGGTGAGCTGCACATGATCGGCGCGACC
ACGCTGGACGAGTACCGCAAGCACATCGAGAAGGACGCCGCGCTGGAACGCCGGTTCCAGCCCGTGGTCGTCGACGAACC
GTCGGTGGAGGACGCAATCTCAATCCTGCGGGGGCTGCGCGAGCGCCTCGAGGTGTTCCACGGCGTCCGCATCCAGGACT
CCGCGCTGGTGTCGGCGGTGACGTTGTCGCACCGCTACATCTCCGACCGGTTCCTGCCCGACAAGGCGATCGATCTGGTC
GACGAGGCCTGCGCGATGCTGCGCACCGAGATTGACTCCCAGCCCGCCGAGCTGGACGCCGCGAGCCGCCGGCTGATGCG
CCTGGAGATCGAGGAAGCAGCCCTGGCCAAGGAGGACGACCCGGCGTCGAAGGCGCGGCTGGACCAGCTGCGCAAGGAGC
TCGCGGACCTGCGGGGCGAGGTCGACGCGATGCGCGCGCAGTGGCAGGCCGAACGCCAGGCCATCCGCCGCGTGCAGGAG
CTGCGGGAGGAGATCGAACAGGTCCGCGTGGAGGCGGAGGCCGCCGAGCGGAACTATGACCTGAACACGGCCGCGGAGCT
GCGTCACGGCAAGCTGCCGGAGCTGGAGCGGCGGCTGCAGGCGGAGGAGGAACGCCTCGCCGCCAAGCAGGGCGAGCGCA
GGTTGCTGCGGGAGGTCGTCACCGACGACGAGATCGCCGGGATCGTCGCCCGCTGGACCGGCATCCCGGTCTCCCGCCTC
GTGGAGGGTGAGCGGCAGAAGCTGCTCCGGTTGGACGAGATCCTGCACGAGCGCGTCGTCGGCCAGGACGAGGCCGTCCA
ACTCGTGGCTGATGCGGTGATCCGGGCCCGCTCCGGGGTGAAGGACCCGCGCCGGCCGATCGGCTCGTTCCTGTTCCTCG
GGCCCACCGGTGTCGGCAAGACCGAGCTCGCCAAGACCCTGGCGGCGGCGCTGTTCGACACCGAGGACAACATGGTCCGC
CTCGACATGAGCGAGTACCAGGAGCGGCACACCGTCTCCCGGCTGGTCGGCGCTCCGCCGGGCTACGTCGGCTACGACGA
GGGCGGCCAGCTCACCGAGGCGGTCCGGCGCAAGCCGTACAGCGTGGTGCTGTTCGACGAGGTGGAGAAGGCGCACCCGG
ACGTGTTCAACACCCTGCTGCAGCTGCTGGACGACGGCCGTCTGACCGACGCGCAGGGCCGCACCGTGGACTTCCGCAAC
ACCGTCGTGGTGATGACCAGCAACATCGGCTCCCAGCACTTGCTGGCCGGGGTCACCCCGGACGGCGAGATCAAGGACGA
CGCGCGCACCGCGGTCATGACCGAACTGCGCGCCCACTTCCGCCCCGAGTTCCTCAACCGCGTCGATGACATCGTGCTGT
TCAAACCGCTCACCCTGCCGGAGATCGAACGGGTCGTGGACCTGCTCGTACAGGATCTGCGCAACCGGCTCGCGGACCGG
CAGCTCACGCTCGAGCTCACCGAAGCGGCCCGACGGCACGTCGCCGCCGAAGGCTTCGACCCCGTCTACGGCGCCCGGCC
GCTGCGCCGCTACCTGCAGCGCGAGGTCGAGACCCGGATCGGCCGCGCCCTGCTCAGCGGCGACGTCACCGACGGGTCCA
CCGTGGTGGTCGACCACACCGACGACGCCGGCCTGACGGTCGCCTGGCGGGCACCGGAGCCAGCCTCGCAAGTCGTCTGA

Protein sequence :
MDPNRLTQKSQEALHDAQTKALRFGHVEVDGEHLLLALLDQPDGLAPRLLAQAGADPDQLRNSVEGELGRRPRVSGPGAQ
PGQVFVTQRLSRLLDAADREAKRLKDEYVSVEHLLLALVEEGSSSAAGRALKDQGLTRDRLLGALTGIRGNQRVTSANPE
VAYEALDKYGRDLVADARAGKLDPVIGRDDEIRRVVQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRVANGDVPEGLRDK
TVFSLDMGSLVAGAKYRGEFEERLKAVLSEVKAAEGRILLFVDELHTVVGAGGGSEGAMDAGNMLKPMLARGELHMIGAT
TLDEYRKHIEKDAALERRFQPVVVDEPSVEDAISILRGLRERLEVFHGVRIQDSALVSAVTLSHRYISDRFLPDKAIDLV
DEACAMLRTEIDSQPAELDAASRRLMRLEIEEAALAKEDDPASKARLDQLRKELADLRGEVDAMRAQWQAERQAIRRVQE
LREEIEQVRVEAEAAERNYDLNTAAELRHGKLPELERRLQAEEERLAAKQGERRLLREVVTDDEIAGIVARWTGIPVSRL
VEGERQKLLRLDEILHERVVGQDEAVQLVADAVIRARSGVKDPRRPIGSFLFLGPTGVGKTELAKTLAAALFDTEDNMVR
LDMSEYQERHTVSRLVGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQLLDDGRLTDAQGRTVDFRN
TVVVMTSNIGSQHLLAGVTPDGEIKDDARTAVMTELRAHFRPEFLNRVDDIVLFKPLTLPEIERVVDLLVQDLRNRLADR
QLTLELTEAARRHVAAEGFDPVYGARPLRRYLQREVETRIGRALLSGDVTDGSTVVVDHTDDAGLTVAWRAPEPASQVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-103 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_6029 YP_003839105.1 ATP-dependent chaperone ClpB VFG2084 Protein 7e-100 42