Gene Information

Name : Micau_5657 (Micau_5657)
Accession : YP_003838739.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6326671 - 6327540 bp
Length : 870 bp
Strand : -
Note : KEGG: saq:Sare_0411 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
GTGACCGTACCGGCGGTCGAGGCGGTCGACGTCTGGCGCACGTACGAGCTGGACGGTGTCTCGGTGTCCGCGCTGCGCGG
GGTGTCGCTCACCATCGACCAGGGCGAGTACGTGGCGGTGATCGGCCCGTCCGGCTCGGGCAAGTCGACGCTCATGCACC
TGCTCGGCGGGCTGGACCGGCCCAGCGGCGGCCGGCTGGTGATCGGCGGGCGGGACGTGACCACGCTCACCGCGCCGGAG
CTGGCGACGCTGCGCAACGAGACCATCGGCTTCGTGTTCCAGGCGTTCCATCTGCTGGCCCGTACGTCGGCAGTGGACAA
CGTGGCGTTGCCGCTCGTCTACCGGGGTGTCGGGGCGCGGCAGCGGCGGGAGCGGGCGGCGGCGATGCTGGGCCGGGTGG
GGCTCGGTCACCGGCTGCACCACCGGCCCAACCAGCTCTCCGGCGGTGAGCAGCAGCGGGTGGCGATCGCCCGGGCGCTG
GTCACCGAACCGGCGGTGCTGCTCGCCGACGAGCCGACCGGCAACCTGGACAGCGCCACCGGCGAGGCGGTGCTGGAGCT
GCTGGAACAGTTGAACGCCGAGTCCGGGGTGGCGCTGGTGATGGTGACCCACGACCAGGAGGTGGCCGCCCGGGCACACC
GGCGCATCGCGGTACGGGACGGGCTCATCCGGTCCGACAGCCTTCATGATCGACCGGCGTCGGACGGCTCCGGCGTACCT
GCGACACTGGACCCCGCTCCCAGCGCGGAGCCCCGGTCCGCGTCCGGAAGCGGCCCGGGGCACCCGCCCGGTGGCCCCGG
TGGCGCCACCGGGGCCACCGGGCGCCTTCCGCGCGCCGCAGGCGGCCGTCAGCAGGGCGACGCCGGATGA

Protein sequence :
MTVPAVEAVDVWRTYELDGVSVSALRGVSLTIDQGEYVAVIGPSGSGKSTLMHLLGGLDRPSGGRLVIGGRDVTTLTAPE
LATLRNETIGFVFQAFHLLARTSAVDNVALPLVYRGVGARQRRERAAAMLGRVGLGHRLHHRPNQLSGGEQQRVAIARAL
VTEPAVLLADEPTGNLDSATGEAVLELLEQLNAESGVALVMVTHDQEVAARAHRRIAVRDGLIRSDSLHDRPASDGSGVP
ATLDPAPSAEPRSASGSGPGHPPGGPGGATGATGRLPRAAGGRQQGDAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_5657 YP_003838739.1 ABC transporter-like protein NC_008702.1.4606598. Protein 6e-46 53
Micau_5657 YP_003838739.1 ABC transporter-like protein NC_012469.1.7686878. Protein 9e-50 50
Micau_5657 YP_003838739.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-39 41