Gene Information

Name : Micau_5482 (Micau_5482)
Accession : YP_003838564.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein ThiC
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0422
EC number : -
Position : 6152069 - 6153661 bp
Length : 1593 bp
Strand : -
Note : KEGG: saq:Sare_4274 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC

DNA sequence :
ATGCAGGCACGTCGCAAGGTGTACGTGGAAGGGTCACGCCCGGACGTCCGGGTGCCGTTCGCCGAGGTGACGCTGACCGG
GGACAACCCGCCGGTACGGCTCTACGACACCTCCGGTCCCGGCTCCGACCCGGAGGTGGGGCTGCCCGCGCTGCGTGGTC
AGTGGATCGCCGAGCGCGGCGACGTGGCCCCGGTACGCGGCGCCGGCACGCCGCTGGCGGGTGTGGAGGGGAAGCGGCCG
ACGCAGCTCGCGTACGCCCGGGCCGGGATCGTCACTCCGGAGATGGAGTTCGTGGCGGTCCGGGAGTCGGTGGCGCCGGA
GTTCGTCCGGGACGAGATCGCGGCCGGGCGGGCCGTGCTGCCGCTCAACGTCAACCACCCCGAGTGCGAGCCGGCCATCA
TCGGCAAGGCGTTCCTGGTGAAGGTCAACGCCAACATCGGCACCTCGGCTGTCACCTCGTCGGTGGCCGAGGAGGTGGAG
AAGCTGACCTGGGCCACCCGGTGGGGCGCGGACACCGTGATGGACCTGTCCACCGGCAAGCGCATCCACGAGACCCGCGA
GGCGATCGTGCGGAACGCGCCGGTGCCGATCGGCACGGTGCCGATCTACCAGGCGCTGGAGAAGGTCGGCGGCGACCCGG
TGAAGCTCAGCTGGGAGGTGTTCCGCGAGACCGTCATCGAGCAGGCGGAGCAGGGCGTCGACTACATGACCGTGCACGCC
GGGGTACTGCTGCCGTACGTGCCGCTGGCGGTGGACCGGGTCACCGGCATCGTGTCGCGGGGCGGCTCGATCATGGCGGC
CTGGTGCCTGGCGCACCACGAGGAGAACTTCCTCTACACGAACTTCCGGGAGCTGTGTTCGCTGCTCGCGAAGTACGACG
TCACGTTCTCCCTCGGTGACGGCCTGCGCCCCGGTTCCATCGCGGACGCCAACGACGAGGCGCAGTTCGCCGAGCTGCGC
ACGCTCGGTGAGCTGACGAAGGTCGCCTGGGAGTACGACGTCCAGGTGATGATCGAAGGCCCCGGGCATGTGCCGATGCA
CAAGATCAAGGAGAACGTGGACCTCCAGCAGGAGTGGTGCCACGAGGCGCCGTTCTACACGCTCGGCCCGCTGACCACCG
ACGTCGCGCCCGCGTACGACCACATCACCTCCGCGATCGGCGCGGCGATGATCGGCATGTTCGGCACCGCGATGCTCTGC
TACGTCACCCCGAAGGAGCACCTCGGGCTGCCCGACCGCGACGACGTGAAGGCGGGCGTGATCGCGTACAAGATCGCCGC
GCACGCGGCCGACCTGGCCAAGGGGCACCCCGGCGCGCAGGCGTGGGACGACGCGCTGTCCAAGGCCCGGTTCGAGTTCC
GCTGGGAGGACCAGTTCAACCTGGCGCTGGACCCGGAGACCGCGCGGGCGTACCACGACGCGACGCTGCCCGCCGAGCCC
GCCAAGACGGCGCACTTCTGCTCGATGTGCGGGCCGAAGTTCTGCTCCATGAAGATCACGCAGGAGTTGAAGGACTACGC
GGCGCGGGGCATGCGCGGCAAGTCGGAGGAGTTCGTCGCCTCCGGGTCACGGGTCTACCTGCCGCTGGCGTGA

Protein sequence :
MQARRKVYVEGSRPDVRVPFAEVTLTGDNPPVRLYDTSGPGSDPEVGLPALRGQWIAERGDVAPVRGAGTPLAGVEGKRP
TQLAYARAGIVTPEMEFVAVRESVAPEFVRDEIAAGRAVLPLNVNHPECEPAIIGKAFLVKVNANIGTSAVTSSVAEEVE
KLTWATRWGADTVMDLSTGKRIHETREAIVRNAPVPIGTVPIYQALEKVGGDPVKLSWEVFRETVIEQAEQGVDYMTVHA
GVLLPYVPLAVDRVTGIVSRGGSIMAAWCLAHHEENFLYTNFRELCSLLAKYDVTFSLGDGLRPGSIADANDEAQFAELR
TLGELTKVAWEYDVQVMIEGPGHVPMHKIKENVDLQQEWCHEAPFYTLGPLTTDVAPAYDHITSAIGAAMIGMFGTAMLC
YVTPKEHLGLPDRDDVKAGVIAYKIAAHAADLAKGHPGAQAWDDALSKARFEFRWEDQFNLALDPETARAYHDATLPAEP
AKTAHFCSMCGPKFCSMKITQELKDYAARGMRGKSEEFVASGSRVYLPLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 6e-179 63
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 6e-179 63
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 9e-166 60