Gene Information

Name : Micau_5408 (Micau_5408)
Accession : YP_003838490.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Unknown
Product : family 5 extracellular solute-binding protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG4166
EC number : -
Position : 6067454 - 6069097 bp
Length : 1644 bp
Strand : -
Note : PFAM: extracellular solute-binding protein family 5; KEGG: sen:SACE_0844 oligopeptide binding protein of ABC transporter

DNA sequence :
ATGAGAGTCTCGAAGCGGGCGAGCGGCGCGCTCGCGGTGGGCGCGGCATTCGCGCTCGTCGCGTCCGGCTGCTCCAGCGG
GAACAACGACGGTGGCGACGCCGGCGCCAGCAAGGACGGCGCGATCGTCATCGACGGCACCCAGCCGGAGAACCCCCTGG
TTCCGGCGAACACCACCGAGACCGGTGGCGGCGCGATCATCGACTGGATGTGGAGCGGTCTGGTCGAGTACCCCAACAAC
GGTGGGGCGCCGCAGAACCTGCTCGCCGAGTCGATCGACACGAGCGACTCGAAGGTCTTCAAGGTCAAGATCAAGCAGAA
CACCAAGTTCCACGACGGCACCACCGTCAAGGCCGAGAGCTTCGTCAAGGCCTGGAACTGGGCTGCGTACGGCCCGAACG
GCGCGCAGAACGCCTCCTTCTTCTCCGACATCCAGGGCTTCGACGAGGTCTACACCGAGGACCCGGACGGCCCGGACGGC
CCGCAGAAGGCCCCGGAGCCGAAGGCCAAGGAGATGTCCGGCCTGAAGGTCGTCGACGACTGGAACTTCGAGGTCACGCT
CTCCGCGCCGACCGCCGTGTTCCCGACCAAGCTCGGGTACAGCGCCTTCGTGCCGCTGCCGGACGCGTTCTTCTCGTCCA
CCCCGGCTGACTTCGGCAAGAAGCCGATCGGTAACGGCCCGGTCAAGCTCGTCTCCTGGCAGGACGACGTCGAGATCAAG
CTGACCCGCTTCGACGACTACAGCCTGCGCGACAAGATGAAGGTCAAGGACGTCACCGTCAAGATCTACCAGGACGACAC
GGCGGCGTACAACGACCTGCTCGCCGGCAACCTGGACTTCCAGCAGCAGGTTCCGGTCTCCGCGCTGGCCGGTGAGAAGT
GGAAGACCGACCTGGCCGAGCGGGCCATGGCCTCGACGACCCCGTCGACGGGCATCATCGCCTTCCCGATCTACGACAAG
CGCTTCCAGAACCCGAAGCTGCGCAAGGCGATCTCGCTGTCCATCGACCGGCAGTCGATCACCGACAAGATCTTCTTCGG
TACCCGTAAGCCGGCCGACAGCTGGGCCAACCCGCTGACCCCGGGCGCCGAGCCGGGCAACTGCACCGCCTGCAAGTTCG
ACGTGGCCCAGGCCAAGCAGCTCCTCCAGGAGGCCGGTGGCTTCCAGGGCAAGCTGACCCTGTCGTACAACGCGGACGCC
AGCCACAAGGAGTGGATGGAGGCCGTCGCCCAGCAGATCAAGACCAACCTGGGCATCGACGCTGTTGCCGTCGGCGTGCC
GACCTTCGCGGTCTTCCGCGCCAACATCAACGCCTACAAGATGACCGGCGCGTACCGGGCCGGCTGGCAGCAGGACTACC
CGGACGTGGAGAACTGGATCAACCCGCTCTACGTCACCGGTGGTTCCTCGAACGACGGCAAGTACAGCAACCCGCAGGTG
GACGCCCTCGCCAAGGAGGCCTCCGCGGCCCCCAGCATCGAGGAGGCCCACAAGAAGTTCGCTGAGGCCGTCAAGCTCAT
CGACCAGGACGTCCCGTCGATGCCGATCTACTTCGGTGGCCAGCAGTCCGGCCACTCGGAGAAGATCAAGAAGCTGGAGC
TGACCAACGTCGGCGAGCTCGACATCACCTCGGTCGAGCTCTGA

Protein sequence :
MRVSKRASGALAVGAAFALVASGCSSGNNDGGDAGASKDGAIVIDGTQPENPLVPANTTETGGGAIIDWMWSGLVEYPNN
GGAPQNLLAESIDTSDSKVFKVKIKQNTKFHDGTTVKAESFVKAWNWAAYGPNGAQNASFFSDIQGFDEVYTEDPDGPDG
PQKAPEPKAKEMSGLKVVDDWNFEVTLSAPTAVFPTKLGYSAFVPLPDAFFSSTPADFGKKPIGNGPVKLVSWQDDVEIK
LTRFDDYSLRDKMKVKDVTVKIYQDDTAAYNDLLAGNLDFQQQVPVSALAGEKWKTDLAERAMASTTPSTGIIAFPIYDK
RFQNPKLRKAISLSIDRQSITDKIFFGTRKPADSWANPLTPGAEPGNCTACKFDVAQAKQLLQEAGGFQGKLTLSYNADA
SHKEWMEAVAQQIKTNLGIDAVAVGVPTFAVFRANINAYKMTGAYRAGWQQDYPDVENWINPLYVTGGSSNDGKYSNPQV
DALAKEASAAPSIEEAHKKFAEAVKLIDQDVPSMPIYFGGQQSGHSEKIKKLELTNVGELDITSVEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDBH8_0922 YP_005160014.1 putative peptide transport system secreted protein Not tested Not named Protein 5e-80 41