Gene Information

Name : Micau_5118 (Micau_5118)
Accession : YP_003838202.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 5758362 - 5759042 bp
Length : 681 bp
Strand : -
Note : KEGG: fra:Francci3_0812 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGAGCCCGATGATCGAGGCCCGGGACGTCACGTACGCGTTCGGCGAGACACCCGCCCTGCGCGGCGCGAGCCTCGCCGT
GTCGGCCGGTGAGGTCGTCGCCGTGATGGGACCGAGCGGCTCCGGCAAGTCGACGCTGCTGCACTGCCTGGCCGGCATCC
TGCGCCCCGACTCCGGCGAGGTCCGGTTCGACGGCACCCGGATCGACACCCTCGGCGAGGCCGACCGCAGCACGCTGCGC
CGCGACAGCTTCGGCTTCGTCTTCCAGTTCGGGCAGCTCGTGCCGGAACTCACCGCGGCGGAGAACGTGGCGTTGCCACT
GCTGCTGCGCGGCGTCCGCCGCACTCCGGCGCTGCGCGCCGCCCGGGGCTGGTTCGAGCGGCTCGGCCTGGCCGGCCTGG
AGCACCGCCGGTCCGGCGAACTGTCCGGCGGGCAGGCCCAGCGGGTCGCGCTGGCCCGCGGTCTGGTCGCCGAGCCCCGT
CTGCTGTTCGCCGACGAGCCCACCGGCGCGCTCGACTCGCTCACCGGCGAGGAGGTGATGACGCTGCTCGTGGACGCCGC
CCGCGAGCGTGGCACCACTGTCGTCCTGGTGACGCACGAGGCGCGCATCGCCGCGTACGCCGACCGCGAGGTCATGGTGC
GCGACGGCCGGGTCAACGCCCCCGCCGGGGTCGTCTCGTGA

Protein sequence : 
MSPMIEARDVTYAFGETPALRGASLAVSAGEVVAVMGPSGSGKSTLLHCLAGILRPDSGEVRFDGTRIDTLGEADRSTLR
RDSFGFVFQFGQLVPELTAAENVALPLLLRGVRRTPALRAARGWFERLGLAGLEHRRSGELSGGQAQRVALARGLVAEPR
LLFADEPTGALDSLTGEEVMTLLVDAARERGTTVVLVTHEARIAAYADREVMVRDGRVNAPAGVVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-35 47
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-36 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-36 46
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_5118 YP_003838202.1 ABC transporter-like protein NC_008702.1.4606598. Protein 2e-34 50
Micau_5118 YP_003838202.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-39 43
Micau_5118 YP_003838202.1 ABC transporter-like protein CP001581.1.gene798.p Protein 4e-30 42
Micau_5118 YP_003838202.1 ABC transporter-like protein NC_012469.1.7685735. Protein 1e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_5118 YP_003838202.1 ABC transporter-like protein VFG2059 Protein 6e-21 45