Gene Information

Name : Micau_4072 (Micau_4072)
Accession : YP_003837165.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Unknown
Product : transposase IS116/IS110/IS902 family protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3547
EC number : -
Position : 4619787 - 4621010 bp
Length : 1224 bp
Strand : +
Note : KEGG: sen:SACE_2352 transposase, IS111A/IS1328/IS1533; PFAM: transposase IS116/IS110/IS902 family protein; SMART: Helix-hairpin-helix DNA-binding class 1

DNA sequence :
ATGCGATGCGTGGAGGCGGGTCTGGTGCACGACGGATATGGCGTCTTCCTGGGCTTGGACGTCGGTAAGGGTGATCACCA
CGCGGTCGGGCTGGCTCCGGACGGCAAGCGGCTGCACGACGCGGCGTTGCCGAACACCGAGGCTCGGCTGCGGCAGCTGT
TCGACAAACTCGCCCGCCATGGCCGTGTCCTGGTGGTGGTCGACCAGCCGGCCTCGATCGGCGCCCTGCCGGTCGCGGTG
GCTCGGGCGGCCGGGCATCAGGTGGCCTACCTGCCTGGCCTGGCGATGCGGCGGATCGCCGATCTGCACCCCGGCAGCGC
GAAGACCGACGCCCGCGACGCCTACGTCATCGCTGATGCGGCCCGCACCCTGCCGCACACGCTGCGCCGGGTCGACACCG
GCGACGAAACTCTGGCCGAACTGGAGATCCTGGTCGGCTTCGACGACGACCTCGCCGGCGAAGCCACCCGCGTGTCCAAC
CGCATCCGAGGACTGCTCACCCAGATCCACCCCGCCCTGGAACGAGTCCTCGGCCCCAAGGTCCACCACAAGGCGGTCCT
GGAACTGCTGTCCCGCTGCGGCGGCCCGGTCGGCCTGCGCAAGGCCGGCCGCCGCAAACTGCTCTCGATCGCCGCCGTCC
ACGCACCTCGCATGGGTGACCGGCTCGTCGAGCAGATCATGGCCGCTCTCGACGAGCAGACCGTCACCGTCCCCGGCACC
CAGGCCGCGGAGACGATCCTGCCCCGCCTGGCCGACAGCCTCCGCGACATCCTGCGGCAACGCGACCAGGCCGCCGCCCA
GGTCGAAAGGATGCTTGATGCGCACCCTCTTGCCCCGGTCCTGACCTCGATGCCCGGCATCGGCGTCAGGACCGCAGCCC
GGATCCTGCTCGAAGTCGGCGACGGCACCGCCTTCGCCACCCCAGGCCACCTCGCCGCCTACGCCGGCCTCGCCCCCGTC
ACCCGACGATCCGGCAGCAGCATCCGTGGCGAACACCCACCCCGCGGCGGCAACAAGAACCTCAAACGCGCGTTCTTCCT
CGCCGCGTTCGCAGCCCTGGCCGACCCCGTGAGCAGGGCCTACTACGACCGCAAACGCGCCGAAGGCAAACGCCACAACG
CCGCCCTCATCTGCCTCGCCCGCCGTCGCTGCGACGTCCTATACGCCATGCTCCGCGACAAGATCCCCTACCAACCCCGC
CCCACGACGCCGATCGCCGCTTGA

Protein sequence :
MRCVEAGLVHDGYGVFLGLDVGKGDHHAVGLAPDGKRLHDAALPNTEARLRQLFDKLARHGRVLVVVDQPASIGALPVAV
ARAAGHQVAYLPGLAMRRIADLHPGSAKTDARDAYVIADAARTLPHTLRRVDTGDETLAELEILVGFDDDLAGEATRVSN
RIRGLLTQIHPALERVLGPKVHHKAVLELLSRCGGPVGLRKAGRRKLLSIAAVHAPRMGDRLVEQIMAALDEQTVTVPGT
QAAETILPRLADSLRDILRQRDQAAAQVERMLDAHPLAPVLTSMPGIGVRTAARILLEVGDGTAFATPGHLAAYAGLAPV
TRRSGSSIRGEHPPRGGNKNLKRAFFLAAFAALADPVSRAYYDRKRAEGKRHNAALICLARRRCDVLYAMLRDKIPYQPR
PTTPIAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0055 CAD33753.1 putative IS110 transposase Not tested PAI I 536 Protein 2e-103 65
CDPW8_2181 YP_005143729.1 transposase-like protein Not tested Not named Protein 5e-57 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_4072 YP_003837165.1 transposase IS116/IS110/IS902 family protein VFG1494 Protein 1e-103 65