Gene Information

Name : Micau_2901 (Micau_2901)
Accession : YP_003836011.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Virulence
Product : ATPase AAA-2 domain-containing protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3305196 - 3307745 bp
Length : 2550 bp
Strand : +
Note : KEGG: saq:Sare_2308 ATPase; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; UvrB/UvrC protein; Clp domain protein; Clp ATPase-like; SMART: AAA ATPase

DNA sequence :
ATGATGGGACCGGGTGACTTCGGCAACGACCCCTGGGACGAGTTCCTGGCCCGATACTTCGGCCGGGGCGAGGGGGGACG
CCGGCCGGCGCACCGGGTCGACATCACGCGCCTGATGACCGCCGACGCCCGGGAGATGCTCGCCGACGCGGCCCGCCGCG
CCGCCCAGAAGCACAGCAACGACCTGGACACCGACCACCTGCTCTGGGCGGCGTTGCAGCGCGAGCCGTTGCGTGACCTG
GTCCGCCGGGCCGGCGCCGACCCGGACGCGCTGCTGGGCGCGCTGGGCGGGCGCGGTGAGGGCGCACCGCGCGGCGAGGT
GCCGCCGAACCTGTCGCTGACCCCGGCCGCGAAGCGGGCGCTGCTGGACGCGCACCAGCTGTCCCGCGCCATGGGCGCCA
ACTACATCGGTCCCGAGCACATCCTGATGGCGTTGCCGCTGAACCCCGAGTCGCCGGCCGGCCGGATGCTCGCCGCCGGC
CGGATCCAGCCCGAATCGTTGCAGGCGGCCAGCGCCGAGCGCGGCGCGGCGAACGCCCCGCGCCCGGACCGGGGCACCCC
GACGCTCGACCAGTACGGCCAGGACCTCACCGAGCTGGCCCGGATGGACCAGATCGACCCGGTGATCGGCCGGGCCGACG
AGATCGAGCAGGCGGTGGAGATCCTGTCCCGGCGGACCAAGAACAACCCGGTGCTGATCGGTGAGGCCGGTGTCGGCAAG
ACCGCGATCGTGGAGGGCCTGGCCGAGCGGATCTGTGACGGCGATGTGCCGCAGACGCTGATCGGCAAGCGGGTGATCCA
GCTCGATCTGTCCGGCCTGGTCGCCGGCACCCGCTACCGGGGTGACTTCGAGGAGCGCCTGAAGAAGGTGATCGACGAGA
TCCGCGCCCACCGCGAGGAGCTGATCATCTTCCTGGACGAGATCCACACGCTGGTCGGCGCGGGCGGCGCCGGCAGCGAG
GGCGGAATGGACGCGTCGAACATGCTCAAGCCCGCCCTGGCGCGCGGCGAGCTGCGGGTGATCGGCGCGACCACGCTCGA
CGAGTACCGGCGCAGCATCGAGAAGGACGCCGCACTGGCCCGCCGGTTCCAGCCGGTGCTGGTGCCCGAGCCGACGGTCG
ACGACACCATCGCGATCCTGCGCGGCCTGCGCGACCGGTACGAGGCGCACCACCAGGTCCGGTTCACCGACGAGGCGCTG
ATCGCCGCCGGTGAGCTGTCCGACCGGTACGTCACCGACCGGTTCCTGCCGGACAAGGCGATCGACCTGATCGACCAGGC
CGGCGCGCGGGTGCGGCTGCGCACCCGTACCCCCGCCGAGGACGTGCGCGAGCTGGAGCAGCAGCTCGACGAGACGCGCC
GGGACAAGGAGCAGGCGGTCTCCGACGAGCAGTACGAGCGGGCCTCCGCGCTGCGCGACCGGCTCGCCGAACTGGAGGAC
CAGGTCCGCCGCGCCCGCGGCGACGAGGGCCCCAGCCACGTGCCCGAGGTGGGGCCGACGGAGATCGCCGAGGTGGTCTC
CCGGGCCACCGGCATCCCGGTCACCCAGCTCACCGAGGAGGAACGCGACCGGCTGCTGCGCCTGGAGGGGCACCTGCACG
AGAAGATCATCGGCCAGGACGACGCGGTCAGCGCCGTCGCCGAGGCGGTACGCCGCTCCCGCACCGGGCTGGCCGACCCG
GACCGGCCGATGGGCAGCTTCCTGTTCCTCGGCCCGACCGGCGTCGGCAAGACCGAGCTGGCCCGCGCGCTCGCCGAGGC
GCTGTTCGGCGAGGCGGACCGGATGGTCCGGGTGGACATGAGCGAGTTCCAGGAACGGCACACGGTCAGCCGGCTGGTCG
GCGCCCCGCCCGGGTACGTCGGCTACGAGGAGGCCGGTCAGCTCACCGAGGCGGTCCGCCGCCGCCCGTACGCGGTGGTG
CTGCTCGACGAGATCGAGAAGGCGCACCCGGACGTGTTCAACATCCTGCTCCAGGTGCTCGACGACGGCCGGCTCACCGA
CAGCCAGGGCCGCACCGTGAACTTCAAGAACACCGTCCTGATCATGACCAGCAACCTCGGCTCGGAGCTGATCACCGGCA
CCCAGCGCACCGTCGGCTTCGCCACCGGCGGGCCCGGCGAGCAGGAGAGCGACGAACTGCGGGAGCGGCTGATGCGCCGG
CTCCAGGAGAACTTCCGCCCGGAGTTCCTCAACCGCATCGACGAGGTGATCATTTTTCAGCGGCTGGAGGCCGAGCAGCT
CCGCCAGATCACCGGGCTGCTGCTGGAGGAGACCCGCCGCCGCATGCACGCCCAGGACATCCAGGTCGACTTCAGTACGG
CGGGCGTCGACTGGCTCGCCGAGCACGGCTACCAGCCGGAGTTCGGCGCCCGGCCGCTGCGCCGGGTGATCCAGCGCGAG
GTCGACAACCGGCTGTCCCGGATGCTGCTGGAGAACGAGGTCTCACCGGGGCAGAAGGTCACCGTCGACACCCGTGACGA
CCAGCTCGTCTTCGACGTCGCCGCCGGTGAGCGGGGCTACACGCCGGCCACCACGTCCCATCCCCGATGA

Protein sequence :
MMGPGDFGNDPWDEFLARYFGRGEGGRRPAHRVDITRLMTADAREMLADAARRAAQKHSNDLDTDHLLWAALQREPLRDL
VRRAGADPDALLGALGGRGEGAPRGEVPPNLSLTPAAKRALLDAHQLSRAMGANYIGPEHILMALPLNPESPAGRMLAAG
RIQPESLQAASAERGAANAPRPDRGTPTLDQYGQDLTELARMDQIDPVIGRADEIEQAVEILSRRTKNNPVLIGEAGVGK
TAIVEGLAERICDGDVPQTLIGKRVIQLDLSGLVAGTRYRGDFEERLKKVIDEIRAHREELIIFLDEIHTLVGAGGAGSE
GGMDASNMLKPALARGELRVIGATTLDEYRRSIEKDAALARRFQPVLVPEPTVDDTIAILRGLRDRYEAHHQVRFTDEAL
IAAGELSDRYVTDRFLPDKAIDLIDQAGARVRLRTRTPAEDVRELEQQLDETRRDKEQAVSDEQYERASALRDRLAELED
QVRRARGDEGPSHVPEVGPTEIAEVVSRATGIPVTQLTEEERDRLLRLEGHLHEKIIGQDDAVSAVAEAVRRSRTGLADP
DRPMGSFLFLGPTGVGKTELARALAEALFGEADRMVRVDMSEFQERHTVSRLVGAPPGYVGYEEAGQLTEAVRRRPYAVV
LLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVNFKNTVLIMTSNLGSELITGTQRTVGFATGGPGEQESDELRERLMRR
LQENFRPEFLNRIDEVIIFQRLEAEQLRQITGLLLEETRRRMHAQDIQVDFSTAGVDWLAEHGYQPEFGARPLRRVIQRE
VDNRLSRMLLENEVSPGQKVTVDTRDDQLVFDVAAGERGYTPATTSHPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 1e-164 51
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-89 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_2901 YP_003836011.1 ATPase AAA-2 domain-containing protein VFG0079 Protein 6e-177 54
Micau_2901 YP_003836011.1 ATPase AAA-2 domain-containing protein VFG0080 Protein 2e-145 50