Gene Information

Name : Micau_2542 (Micau_2542)
Accession : YP_003835657.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Virulence
Product : amino acid permease-associated protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0531
EC number : -
Position : 2892872 - 2894278 bp
Length : 1407 bp
Strand : +
Note : PFAM: amino acid permease-associated region; KEGG: saq:Sare_1963 amino acid permease-associated region

DNA sequence :
ATGACAACCTCGAACGACCTGGCCCGCTACGGCTATCGGCAGGAGCTCAGCCGCCAGCTGCGGTTTCGGGACCTGTTGGC
GTACGGCCTGGTGTACATGGTCCCGATCGCGCCGATGGCGATCTTCGGCAGCGTCTACACGGGCTCTGGCGGCATGGTGG
CCCTCGCCTACGCCATCGGCGTGGTGGCGCTGGTGTTCACCGCGTTCTCGTACGCGCAGATGGTGAAGGCGTTCCCGATG
TCAGGCAGCGTCTACAACTACGCCGGTCGGGGCATCAGCCCGCCGGTCGGGTTCCTCGCCGGCTGGGTGATCCTCCTCGA
CTACGTGCTCGTTCCCGGCCTGCTGTACCTGGTGGCGTCGGTGGCGATGCACTCCACGGTGCCGGCGGTGCCGGTGTGGC
TGTGGCTGCTCGGGTTCGTCGCGGTCAACACCGTTGTCAACTCGGTCGGCATCCGCATGACGGCGGTGGTCACTCGGGTG
ATGCTCGTCGGTGAGCTGATCGTCCTGGCATTGTTCCTGGTCGTCGCCGGTTGGGCACTCGCGACGGGCACGGGCCGGTT
CAGCTGGGATGCGTTCTACAACGCCGACACCTTCACCTGGTCCCTCGTGGCGGGGGCGGTGTCAATCGCGGTGCTGTCGT
TCCTGGGCTTCGACGGCATCTCCATGTTGGCGGAGGAGACCCGTGACGGCGCCCGGCAGATCGGCCGGGCGATGGCGGCC
GTGCTCGTCCTGGCGGGGGTGCTGTTCATCGCGCAGACATGGCTGGCGGCGATGCTCGTGCCCAACCCCGGCGGGCTGCT
GGCCGAGGGCGACGTGCACGGCACCGCCTTCTACGACGCCGCCGCGGTGGCCGGCGGGAGCTGGCTGGCGACGGTGTGCG
CGGTGGCGACCGCGATCGCATGGGGGCTGCCGAACTCGATGGTCGCGCAGGTCGCCACGTCCCGGCTGCTGTACGCCATG
GCCCGCGACCGGCAGCTCCCCGCGTTCCTGGCGAAGGTGTCGGTGCGCCGCAGCGTGCCGATCAACGCCACTCTGCTCAC
GGGTGTCGTGTCCCTGGCCCTGGGCTTGTACATGGCCACCCGCTCCGACGGGATCACGCTGTTGTCGTCGCTGATCAACT
TCGGGGCGATGGTGGCGTTCCTGGTCCTGCACGTCTCCGTGGTCGTGCACCACCTGATCCGCCGTCGCAGCGGCAACTGG
TTCGCGCACCTGCTCATGCCCGCCGCCGGGTTCGTGATCCTCGCCTACGTGGTGGTGAACGCCAACATCGCCGCCCAGCG
CCTCGGCCTGGCCTGGCTGGGCCTCGGCGTGCTGGTCCTGGCCGGCCTGTACCTGACCGGCCGCCGGCCGGTGTTGTCCG
GCCTGGCCTCCACCCAGGCCGCTGGGCGTGACATGGAGCGGGTGTGA

Protein sequence :
MTTSNDLARYGYRQELSRQLRFRDLLAYGLVYMVPIAPMAIFGSVYTGSGGMVALAYAIGVVALVFTAFSYAQMVKAFPM
SGSVYNYAGRGISPPVGFLAGWVILLDYVLVPGLLYLVASVAMHSTVPAVPVWLWLLGFVAVNTVVNSVGIRMTAVVTRV
MLVGELIVLALFLVVAGWALATGTGRFSWDAFYNADTFTWSLVAGAVSIAVLSFLGFDGISMLAEETRDGARQIGRAMAA
VLVLAGVLFIAQTWLAAMLVPNPGGLLAEGDVHGTAFYDAAAVAGGSWLATVCAVATAIAWGLPNSMVAQVATSRLLYAM
ARDRQLPAFLAKVSVRRSVPINATLLTGVVSLALGLYMATRSDGITLLSSLINFGAMVAFLVLHVSVVVHHLIRRRSGNW
FAHLLMPAAGFVILAYVVVNANIAAQRLGLAWLGLGVLVLAGLYLTGRRPVLSGLASTQAAGRDMERV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1247 NP_805052.1 amino acid permease Not tested SPI-2 Protein 3e-65 42
ycjj YP_216387.1 amino acid permease Not tested SPI-2 Protein 4e-65 42
orf48 NP_460344.1 amino acid permease Not tested SPI-2 Protein 4e-65 42
STY1743 NP_456146.1 putative amino acid permease Not tested SPI-2 Protein 3e-65 42
ORF48 CAA68204.1 amino acid permease YeeF like protein Not tested SPI-2 Protein 7e-62 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_2542 YP_003835657.1 amino acid permease-associated protein VFG0480 Protein 2e-65 42