Gene Information

Name : Micau_2356 (Micau_2356)
Accession : YP_003835476.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : -
Position : 2503789 - 2504850 bp
Length : 1062 bp
Strand : +
Note : KEGG: stp:Strop_1874 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding

DNA sequence :
ATGGCGAGCGTCTCCGTCGACGAGGCGATGCGTCGTGCCATCGAACTGGCCGTGCGCGGCCTCGGCGCCACGAGCCCCAA
CCCGGTGGTCGGCTGCGTGCTGCTCGACACCGACGGCGAGGTCGTCGGCGAGGGCTTCCACGCGTACGCCGGCGGCCCGC
ACGCGGAGATCGTCGCGCTGGCCCAGGCCGGCACGCGGGCCCGCGGCGGCACCGCGGTGGTCACCCTGGAACCCTGCGAC
CACACCGGCCGCACCGGCCCGTGCAGCCACGCGCTCATCGCCGCCGGGGTGTCCCGCGTGGTGATCGCCGTGCCCGATCC
CAACCCGGTCGCCTCCGGCGGCGCCGCCACGCTGCGCGCCGCCGGGGTCCAGGTCGCTTTGGGGGTACGCGCGCAGGAGG
CCGAGGCCGGCAACGTCGCCTGGCTCACCTCGATGCGCCGCGGCTGGCCGTACGTGATCTGGAAGTACGCGGCCACGCTC
GACGGGCGTTCCGCCGCCGCCGACGGCACCAGCATGTGGATCACCTCCGAGGCGGCCCGGATCGACGTGCACGCGCTGCG
CGGCACCGTCGACGCGGTGCTCGCCGGGGTGGGCACCGTGCTCACCGACGACCCCCGGCTGACCGCCCGCAACCTGCGCG
ACGGCACCATGGCCATCCGGCAGCCGCTGCGGGTGGTGGTGGACAGCTCGGGGCGTACCCCGGCCGACGCCCGGGTCCGC
GACGGCGCCGCCCGCACGTGGATCGCCACCGCCGCGGAGGTCGGCGCCGGGCCGGACGGCCGGGTCGACCTGCCGGCGCT
GCTCGCGGAGCTGCACCACCGGGGCGTGCGGGCCGCGCTGCTGGAGGGCGGGCCGACGCTGGCCGGCGCGTTCCTCGCCG
CCGGCCTGGTCGACAGGATCGTCGGGTACGTCGCGCCGAAGCTGCTCGGCGCCGGCCCGACCGCGCTGCTCGACGCGGGC
GTGAGCACCATCGCCGACGCCATCGATCTGGAGATCACCGACGTTACGCGGGTCGGTCCCGACCTGCGGATCACCGCGCT
GCCCCGGAAGAGGGAGAGCTGA

Protein sequence :
MASVSVDEAMRRAIELAVRGLGATSPNPVVGCVLLDTDGEVVGEGFHAYAGGPHAEIVALAQAGTRARGGTAVVTLEPCD
HTGRTGPCSHALIAAGVSRVVIAVPDPNPVASGGAATLRAAGVQVALGVRAQEAEAGNVAWLTSMRRGWPYVIWKYAATL
DGRSAAADGTSMWITSEAARIDVHALRGTVDAVLAGVGTVLTDDPRLTARNLRDGTMAIRQPLRVVVDSSGRTPADARVR
DGAARTWIATAAEVGAGPDGRVDLPALLAELHHRGVRAALLEGGPTLAGAFLAAGLVDRIVGYVAPKLLGAGPTALLDAG
VSTIADAIDLEITDVTRVGPDLRITALPRKRES

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 3e-53 43
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 3e-53 43