Gene Information

Name : Micau_2162 (Micau_2162)
Accession : YP_003835283.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Virulence
Product : ABC transporter-like protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 2305723 - 2306595 bp
Length : 873 bp
Strand : +
Note : KEGG: sgr:SGR_3181 putative iron-siderophore ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
GTGACCGCGCTGCTGTCCACCCGCGACCTGGTCGTCGGCTACGAGGGCCGCACAGTGCTGGACGGACTGGACCTCGACCT
GCCGGCCGACACGTTCACCGTGATCGTCGGCCCGAACGCCTGCGGCAAGTCGACGCTGCTGCGCACGATGGCCCGGCTGC
TCACGCCCCGGCGCGGCGCGGTGCTGCTCGACGGCGCGGCGATCCGCGATCTGCCGACCCGGGACGTGGCCCGGCGGCTC
GGCGTCCTGCCGCAGAGCCCGCTGGTGCCCGAGGGGATCACCGTGGCCGACCTGGTCGGGCGCGGCCGGCAGCCGTACCA
GCGCTGGTGGCGGCAGTGGTCGGCCGAGGACGGACGGGCGGTCGAGGAGGCCATGCGGCTGGCCGACGTCAGCGCGCTCG
CCGACCGCCCGGTGGACACGCTCTCCGGCGGGCAGCGCCAGCGGGTGTGGATCGCCATGACTCTGGCCCAGGACACCGAC
GCGCTGCTGCTGGACGAGCCGACCACGTTCCTCGACCTGGCCCACCAGGTCGAGGTGCTGGACCTGCTGCACCGGCTGCG
CGCCGAACGCGGCCGGACAGTGGTGGCCGTGCTGCACGACCTCAACCAGGCGGCCAGGTACGCCGACCACCTGATCGCCA
TGCGCGACGGCGCGGTGGTGGCCGCCGGCAAGCCGCGCGAGATCCTCACCGCGGATCTGGTCCGCGACGTGTTCGGGCTG
GACTGCGTGGTCGTGCCCTGCCCGGTCAGCGGCGCCCCGCTCGTGGTGCCCGCCCTCACCCAGACCGGATCCGCCCAGGC
CGGATCCGCCCAGACCTCGGCCGTTCCGGCCGTCACGCCGGCCACGGCCGGCGCCCCCGTCGGCGACGCCTGA

Protein sequence : 
MTALLSTRDLVVGYEGRTVLDGLDLDLPADTFTVIVGPNACGKSTLLRTMARLLTPRRGAVLLDGAAIRDLPTRDVARRL
GVLPQSPLVPEGITVADLVGRGRQPYQRWWRQWSAEDGRAVEEAMRLADVSALADRPVDTLSGGQRQRVWIAMTLAQDTD
ALLLDEPTTFLDLAHQVEVLDLLHRLRAERGRTVVAVLHDLNQAARYADHLIAMRDGAVVAAGKPREILTADLVRDVFGL
DCVVVPCPVSGAPLVVPALTQTGSAQAGSAQTSAVPAVTPATAGAPVGDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-65 54
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-57 51
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 3e-57 51
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 3e-57 51
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 3e-57 51
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-52 50
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 1e-56 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 1e-56 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 7e-44 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-46 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 7e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_2162 YP_003835283.1 ABC transporter-like protein BAC0164 Protein 2e-52 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_2162 YP_003835283.1 ABC transporter-like protein VFG0925 Protein 2e-61 54
Micau_2162 YP_003835283.1 ABC transporter-like protein VFG1042 Protein 2e-52 50