Gene Information

Name : Micau_0165 (Micau_0165)
Accession : YP_003833310.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 164893 - 167484 bp
Length : 2592 bp
Strand : +
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: saq:Sare_0120 ATPase; SMART: AAA ATPase

DNA sequence :
ATGAACACGGAACGTCTCACCACCAAGAGCCGCGAAGCCATCACCGGTGCCGTCGCGCTGGCGAACCAGCGCGGTCACGC
CACCGTGGAGCCCTGGCACCTGCTGCTGTCACTGCTGGACACCGAAGGCTCGACCGCTGCGGGCCTGCTGCGCGCCGTCG
GAGCCGACCCCGCCGAGCTGCGCCGCGTCGCCCAGCGCTCGGTCGACGCGCTGCCGGCCGCACGCGGGTCGAGCATCGCC
GAGCCGACCCTGGCCCGCGAGTTCGTCAACGCCATCGGCGCCGCCGAGCAGATCGCGCGGCCGCTGGGCGACGAGTACAC
CTCCACCGAGCACCTGCTGGCCGGGCTGGCCCGGGTCGGCGGCGCGGTCTCGGTAGCGCTGAAGAACTCCGGCGCCACCG
AGGAGAACCTGGTCGCCGCGTTCCCGACCGTCCGGGGCGGGGACCGCCGGGTCACCACCGCCGACCCGGAGCAGACCTAC
CAGGCCCTGGCCAAGTACGGCGTGGACCTCACCGCCAGCGCCCGCGACGGCAAGATCGACCCGGTGATCGGCCGGGACTC
GGAGATCCGCCGGGTGATCCAGGTGCTGTCCCGGCGTACCAAGAACAACCCGGTGCTGATCGGCGAGCCGGGCGTCGGCA
AGACCGCGATCGTGGAGGGCCTGGCCCAGCGGATCGTGGCCGGCGACGTGCCGGAGTCGCTGCGGGACAAGAAGCTCGTC
TCGCTCGACCTCGGCGCGATGGTCGCCGGTGCGTCCTACCGCGGTCAGTTCGAGGAGCGGCTGAAGTCCGTGCTGGAGGA
GATCAAGAACTCCGACGGCCAGGTCATCACGTTCCTGGACGAGCTGCACACCGTGGTCGGCGCCGGCAAGGGCGAGGGCT
CGATGGACGCCGGCAACATGCTCAAGCCGATGCTGGCGCGCGGCGAGCTGCGGATGGTGGGCGCGACCACGCTCGACGAG
TACCGCGAGCACATCGAGAAGGACCCGGCCCTGGAGCGCCGCTTCCAGCCGGTGCTGGTCGGCGAGCCGACCATCGAGGA
CACCATCGGCATCCTGCGCGGGCTCAAGGAGCGCTACGAGGTGCACCACGGCGTACGGATCACCGACGCCGCACTCGTGG
CCGCCGCCTCGCTCTCCGACCGGTACATCACCGACCGGTTCCTGCCGGACAAGGCGATCGACCTGGTGGACGAGTCGGCG
TCCCGGCTGCGCATGGAGATCGACTCGCGCCCGGTCGAGGTGGACGAGATCGAGCGGGCGGTACGCCGCCTGGAGATCGA
GGAGATGGCGCTCGCAAAGGAGCCGGACGCCGCGTCCGCCGAGCGTCTGGAGCGGCTGCGCAAGGAGCTGGCCGACAAGC
GCGAGCAGCTCACCGCGCTCTCCGAGCGCTGGCAGACCGAGAAGAGCCACATCACCAAGCTCTCCACCGCCAAGGAGGAG
CTGGAGCGCCTCGGTGGCGAGGCCGAGCGGGCCGAGCGCGACGGCGAGCTGGAACGCGCCGCCGAGCTGCGGTACGGCCG
GATCCCCGCGCTGCGGACCGAGCTGAAGCAGGCCGAGGAAGAGCTGGCCCGGCTCCAGGCCGACGGCGCGATGCTCAAGG
AGGAGGTCGGCGCGGACGACATCGCCGCAGTGGTCGCCTCCTGGACCGGCATCCCCGCCGGTCGGCTGCTCGAAGGCGAG
ACCGCCAAGCTGCTCCGGATGGAGGAAACGCTGCGCGGCCGCGTGGTCGGCCAGGCCGAGGCGGTGGGCGCGGTCTCCGA
CGCGGTACGCCGCGCCCGGGCCGGCGTCGCCGACCCGGACCGGCCGACCGGCAGCTTCCTGTTCCTCGGCCCGACCGGCG
TCGGCAAGACCGAGCTGGCAAAGGCGCTCGCCGAGTTCCTCTTCGACGACGAGCGGGCCATGGTCCGCATCGACATGAGC
GAGTACGGCGAGAAGCACTCGGTGGCCCGCCTGGTCGGCGCCCCACCCGGGTACGTCGGCTACGAGGAGGGCGGCCAGCT
CACCGAGGCGGTACGCCGCCGGCCGTACTCGGTGATCCTGCTGGACGAGGTGGAGAAGGCCCACCCGGACGTCTTCGACG
TGCTGCTCCAGGTGCTCGACGACGGCCGGCTCACCGACGGTCAGGGCCGTACCGTGGACTTCCGCAACGCGATCCTGATC
CTCACCTCGAACCTCGGTTCGTCGGTGATCAGCGACCTGACGCTCACCGAGAACGAGCGCCGGGAGGGTGTGCTCGCGGT
GGTCCGGTCGCACTTCAAGCCGGAGTTCCTCAACCGGCTCGACGACATCGTGGTGTTCGCCGCGCTCCAAGGCGAGGACC
TGCGGTCGATCGTGGACATCCAGCTCGACCGGATGCGCCGCCGGCTGGCCGACCGCCGGCTGGGCCTGGAGATCACCGAC
GCGGCCCGCACGTGGCTGGCCGAGCACGGGTACGACCCGATCTACGGTGCCCGCCCGCTGCGCCGGCTGGTGCAGTCGGC
GATCGGCGACCAGCTCGCGAAGGCGCTGCTGGCCGGTGACATCCGCGACGGCGACACGGTCCGCGTCGACCTGTCCGACT
CCAAGGAGTCCCTGGCGGTGACCGCCGCCTGA

Protein sequence :
MNTERLTTKSREAITGAVALANQRGHATVEPWHLLLSLLDTEGSTAAGLLRAVGADPAELRRVAQRSVDALPAARGSSIA
EPTLAREFVNAIGAAEQIARPLGDEYTSTEHLLAGLARVGGAVSVALKNSGATEENLVAAFPTVRGGDRRVTTADPEQTY
QALAKYGVDLTASARDGKIDPVIGRDSEIRRVIQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVPESLRDKKLV
SLDLGAMVAGASYRGQFEERLKSVLEEIKNSDGQVITFLDELHTVVGAGKGEGSMDAGNMLKPMLARGELRMVGATTLDE
YREHIEKDPALERRFQPVLVGEPTIEDTIGILRGLKERYEVHHGVRITDAALVAAASLSDRYITDRFLPDKAIDLVDESA
SRLRMEIDSRPVEVDEIERAVRRLEIEEMALAKEPDAASAERLERLRKELADKREQLTALSERWQTEKSHITKLSTAKEE
LERLGGEAERAERDGELERAAELRYGRIPALRTELKQAEEELARLQADGAMLKEEVGADDIAAVVASWTGIPAGRLLEGE
TAKLLRMEETLRGRVVGQAEAVGAVSDAVRRARAGVADPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDERAMVRIDMS
EYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVILLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNAILI
LTSNLGSSVISDLTLTENERREGVLAVVRSHFKPEFLNRLDDIVVFAALQGEDLRSIVDIQLDRMRRRLADRRLGLEITD
AARTWLAEHGYDPIYGARPLRRLVQSAIGDQLAKALLAGDIRDGDTVRVDLSDSKESLAVTAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 5e-95 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_0165 YP_003833310.1 ATP-dependent chaperone ClpB VFG2076 Protein 1e-106 45
Micau_0165 YP_003833310.1 ATP-dependent chaperone ClpB VFG2084 Protein 8e-98 44