Gene Information

Name : Micau_1616 (Micau_1616)
Accession : YP_003834747.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1682378 - 1683046 bp
Length : 669 bp
Strand : +
Note : KEGG: saq:Sare_1458 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver; transcriptional regulator domain-containing protein

DNA sequence : 
ATGCGGGTACTGGTGGTCGAGGACGAGCGCAACCTCGCCGACGCGATCGCGCGCGGGCTGCGCAAGCGCGGGATGGCTGT
CGACGTCGCCTACGACGGCGACGCCGGGCACGAGGCGGCGTTCGTCACCCGCTACGACGTGGTGATCCTGGACCGCGACC
TGCCCGGCGTGCACGGCGACCGGATCTGCGCCGACCTGGCCGCCTCCGGCGCGCTGACCCGGGTGCTGATGCTGACCGCC
AGCGTCACCGTCGCCGACCGGGTCGAGGGGTTGCAGCTCGGCGCCGACGACTACCTGGCCAAGCCGTTCGCGTTCGACGA
GCTGGTGGCCCGGGTGCAGGCGCTCGGCCGCCGCGCCACCCCGGCCGCGCCGCCGGTGCTGGAGGTGGCCGATCTGGTGC
TCGACCCGGCCCGCCGGGTGGTGAGCCGGGGCGGCGTGCCGCTCGACCTCACCAACAAGGAGTTCGGCGTGCTCGCCGAG
CTGCTCAAGGCGCGCGGCGCGGTGGTGTCCAGCGAGGAGCTGCTGGAGCGGGTCTGGGACGCCAACACCGACCCGTTCAC
CACGATCGTCCGCGTCACCGTGATGACACTGCGCAAGAAGCTCGGCGACCCGCCTCTCATCGACACCGTCGTGGGCGCGG
GCTACCGCATCGGCGGGGTACGGCAGTGA

Protein sequence : 
MRVLVVEDERNLADAIARGLRKRGMAVDVAYDGDAGHEAAFVTRYDVVILDRDLPGVHGDRICADLAASGALTRVLMLTA
SVTVADRVEGLQLGADDYLAKPFAFDELVARVQALGRRATPAAPPVLEVADLVLDPARRVVSRGGVPLDLTNKEFGVLAE
LLKARGAVVSSEELLERVWDANTDPFTTIVRVTVMTLRKKLGDPPLIDTVVGAGYRIGGVRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_1616 YP_003834747.1 response regulator receiver Y16952.3.orf35.gene. Protein 9e-45 54
Micau_1616 YP_003834747.1 response regulator receiver U82965.2.orf14.gene. Protein 1e-48 53
Micau_1616 YP_003834747.1 response regulator receiver BAC0125 Protein 9e-33 46
Micau_1616 YP_003834747.1 response regulator receiver BAC0308 Protein 5e-32 45
Micau_1616 YP_003834747.1 response regulator receiver BAC0638 Protein 1e-25 43
Micau_1616 YP_003834747.1 response regulator receiver BAC0111 Protein 2e-34 42
Micau_1616 YP_003834747.1 response regulator receiver BAC0197 Protein 3e-30 42
Micau_1616 YP_003834747.1 response regulator receiver BAC0347 Protein 2e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_1616 YP_003834747.1 response regulator receiver VFG0596 Protein 4e-28 41