Gene Information

Name : Micau_1462 (Micau_1462)
Accession : YP_003834598.1
Strain : Micromonospora aurantiaca ATCC 27029
Genome accession: NC_014391
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1523316 - 1524047 bp
Length : 732 bp
Strand : -
Note : KEGG: cai:Caci_4805 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGGACCCGATCGACGGGGTGCTGGAACTGCGTGACGTACGCCGGACCCACGGCGCCGGTGAGGCCGCCGTGCACGCGCT
GCGCGGCGTGAGCCTGACCGTGCGGGCCGGTGAGCTGGTGGCGGTGATGGGCCCCTCCGGGTCCGGCAAGTCCACGCTGC
TGGCGCTCGCCGGCGGCCTGGACCGGCCCACCGGCGGCGAGGTGGTGGTCGAGGGCGAGACCCTGGTCGGGCTGTCCGCC
CGCGAGCTGGCCCGGCTGCGGCGCCGCCGGATCGGGTACGTCTTCCAGGACCTGAACCTGCTCGGCAGCCTGACCGCCGT
GGAGAACGTGGCGCTGCCACTGGAACTGGACGGCACCGGCGTACGGGCGGCCCGCCAGCTGGCGCTGGCCGCGCTGCGCG
AGGTCGACCTAGAGGACCTGGCCGACCGCTTCCCGGACCAGATGTCGGGTGGCCAGCAGCAGCGGGTGGCGATCGCGCGG
GCCCTCGTCGGCGAACGCCGCCTGGTCCTCGCCGACGAGCCGACCGGCGCGCTGGACTCCCAGACCGGCGAGGCGGTGCT
GCATCTGCTGCGCCGCCGGGTGGACGCCGGAGCGGCCGGGGTGCTGGTCACCCACGAGGCCCGGCACGCCGGCTGGGCGG
ACCGGGTGGTCTTCCTGCGCGACGGGGTGATGGTCGACTCGACCGCCCCGCTGATCGGCGTCGACCACCTGCTCAGCGGC
AGCACCCGGTGA

Protein sequence : 
MDPIDGVLELRDVRRTHGAGEAAVHALRGVSLTVRAGELVAVMGPSGSGKSTLLALAGGLDRPTGGEVVVEGETLVGLSA
RELARLRRRRIGYVFQDLNLLGSLTAVENVALPLELDGTGVRAARQLALAALREVDLEDLADRFPDQMSGGQQQRVAIAR
ALVGERRLVLADEPTGALDSQTGEAVLHLLRRRVDAGAAGVLVTHEARHAGWADRVVFLRDGVMVDSTAPLIGVDHLLSG
STR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 46
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-30 46
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 46
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-29 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Micau_1462 YP_003834598.1 ABC transporter-like protein NC_008702.1.4606598. Protein 1e-27 50
Micau_1462 YP_003834598.1 ABC transporter-like protein CP001581.1.gene598.p Protein 2e-27 45
Micau_1462 YP_003834598.1 ABC transporter-like protein NC_012469.1.7686878. Protein 6e-34 44
Micau_1462 YP_003834598.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-28 42