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Name : clpC (bpr_I0873) Accession : YP_003830197.1 Strain : Genome accession: NC_014387 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 1068273 - 1070837 bp Length : 2565 bp Strand : + Note : - DNA sequence : ATGGAATCCAGGTTTACAGTAATGGCGGCAGACGCGCTCAAGCTTGCTAAGCGCACAGCCAGAAGTCTTAAACTCAATTA TGTGGGTACAGAGCATATCCTCATGGGTCTTATTTTGGAAGATGGAAGTGTGGCTTCCAGAATCCTTATAGATAATGGAA TTGATGAGAACAGGATGATGGATATGATAAGGGATCTTATCGTTCCTGACTCCAGCGTACGTACCCTTGATAAAGATGGT TTTTCTCCAAGAGCTGAGAAGGTTTTGGAGGAAGCACACAGGATGGCAGAACGTTTCCATGCTGACAAGACAGGTACAGA GCATATTCTTCTTGCTCTTATCAGAGAGGGTGAGAATGTAGCTGTCAGACTTATCAGTACGCTCAATGTTCCTGCCCAGA AGATATACGCAGAGACACTTGCTGCCATGGGAGAGGACCCTAACCTTGTTAAGGAGGACCTTGGCAAAAAAGCTGCTCCC AAGTCCGGCAAGAAGGCTTCAATTCTTGCACAGTATAGCCGTGATATGACTGCACTTGCTCTTGAGAATAAGCTTGATCC GGTTATCGGAAGAGAAAGAGAGATAAAGAGAGTTATCCAGATTCTCTCAAGGCGTACCAAGAATAATCCATGTCTTATCG GAGAACCCGGTGTTGGTAAGACTGCTGTAGTAGAGGGACTTGCACAGCGTATTGCAGCCGGTGATGTTCCGCTTACTGTT CAGAATAAGAGACTTGTAACTCTGGACCTTTCAGGAATGATAGCAGGTTCCAAGTACAGAGGCGAATTCGAAGAGAGGAT CAAGAAGGTCATCAAAGAGGTTTCCGAGGATGGCAATATTATTCTTTTTGTAGATGAGATGCATACACTTATCGGAGCAG GCGGAGCAGAGGGTGCAATTGATGCTTCCAATATTCTCAAGCCTTCACTTGCAAGAGGCGAGATTCAGATGATTGGTGCA ACGACTATTACTGAATATCGCAAATATGTTGAGAAGGATGCAGCTCTTGAGCGTAGATTCCAGCCTGTAAATGTAGATGA ACCTACCAAGGAAGAAGCTACTGAAATCCTAAAGGGAATCGTCAGCAAGTATGAGGATCATCACAAGGTTACTATAACAC CTGAAGCTATAAAGGCTGCTGTAGATCTTTCAGAGAGATATATCAATGACAGAAACCTGCCTGACAAGGCTATTGATCTT ATAGATGAGGCTGCAAGTGCAGTCAGACTCCGCACTATGGGCGTTTCACCCAAGGTGAAGGAAATCGAGGAAACTATCAG AAATACTGATATAGAGATTGAGAATGCTCTCAAGAACAGTGACTTTATCAGGGCCGGAGAGCTTAACAAGCAGCAGAATC AGCTTCTTGGCAAGTTATCAAGGGTCAAGAATGCAGAAAAGAAAAAACAGCTCAGCGCAGGCTTTATCGTTAATGAGAAT GATATAGCAGAGGTAGTTGCTGAGTGGACCAGAATTCCGGTTAAGAAGATTGCAGAGAAAGAGTCTGAGAAGCTTCTTAA GCTTGAATCTGTTCTTCATAAGAGGGTGATCGGCCAGGAAGACGCAGTCAAGGCTGTTTCCAAGGCTATCAGGAGAGGAA GAGTAGGCCTTCAGGATCCTAACAGACCTATAGGTTCATTCCTGTTTTTGGGACCTACAGGTGTAGGTAAGACAGAACTT TCCAAGGCACTTGCCGAGGCTATGTTCGGCGATGAGAATGCACTTATCAGAGTTGATATGTCTGAGTATATGGAAGGCCA TTCGGTATCCAAGATGATCGGATCACCTCCAGGATACGTTGGATTTGATGATGGAGGACAGCTTTCTGAGAAGGTCAGAA GACATCCTTATTCAGTAATCCTTTTTGACGAGATTGAGAAGGCACATCCTGATATCTTCAATGTGCTTTTACAGGTTCTT GATGATGGACATATCACAGATTCCAAGGGTAGAAAGGTCAGCTTCAAGAATACTATTCTTATCATGACTTCAAATGTTGG AGCTCAGAAGATTGTGGACCCCAAGAAGCTCGGTTTTGGCGCAGGCCAGGATGCCAAGAAAGATTACGAGGACATGAAGT CGGGAGTTATGGAAGAGGTCAAAAAGCTCTTTAAGCCTGAATTCATCAACCGTATTGATGAGATAATGGTATTCCATACT CTGACTGAAAAAGAGATGATGGATATTGTAACTCTTTTGTCTCAGAATCTTAGCAAGAGATGCAAGACTCAGATGGGAAT TGATCTGACAATCACACCTGCGGTTAAAAAGTATCTTGTTGCCAAACATTCAGATGCCAAGATGGGTGCAAGACCTCTTA AGAGAGCTATTCAGTCAACTATAGAGGATGCTATGGCTGAGGAGCTTCTGCGTGGTAATATCAAACCTGAGACTGCTGTT ACTGTAGGGCTTAAGGATGAGAAGATCATTTTTACCACTAATGAGGGTAAAACATCAGTTAAAAAGGCAAATATCAAGAC AACCAAGACTTCCAGAACAGCCAAGGCCAAGGTGAGTGTTTCTACCAAAAAGCCGGCTAAAAAAACTGTAAAAAAGAAGA AGTAA Protein sequence : MESRFTVMAADALKLAKRTARSLKLNYVGTEHILMGLILEDGSVASRILIDNGIDENRMMDMIRDLIVPDSSVRTLDKDG FSPRAEKVLEEAHRMAERFHADKTGTEHILLALIREGENVAVRLISTLNVPAQKIYAETLAAMGEDPNLVKEDLGKKAAP KSGKKASILAQYSRDMTALALENKLDPVIGREREIKRVIQILSRRTKNNPCLIGEPGVGKTAVVEGLAQRIAAGDVPLTV QNKRLVTLDLSGMIAGSKYRGEFEERIKKVIKEVSEDGNIILFVDEMHTLIGAGGAEGAIDASNILKPSLARGEIQMIGA TTITEYRKYVEKDAALERRFQPVNVDEPTKEEATEILKGIVSKYEDHHKVTITPEAIKAAVDLSERYINDRNLPDKAIDL IDEAASAVRLRTMGVSPKVKEIEETIRNTDIEIENALKNSDFIRAGELNKQQNQLLGKLSRVKNAEKKKQLSAGFIVNEN DIAEVVAEWTRIPVKKIAEKESEKLLKLESVLHKRVIGQEDAVKAVSKAIRRGRVGLQDPNRPIGSFLFLGPTGVGKTEL SKALAEAMFGDENALIRVDMSEYMEGHSVSKMIGSPPGYVGFDDGGQLSEKVRRHPYSVILFDEIEKAHPDIFNVLLQVL DDGHITDSKGRKVSFKNTILIMTSNVGAQKIVDPKKLGFGAGQDAKKDYEDMKSGVMEEVKKLFKPEFINRIDEIMVFHT LTEKEMMDIVTLLSQNLSKRCKTQMGIDLTITPAVKKYLVAKHSDAKMGARPLKRAIQSTIEDAMAEELLRGNIKPETAV TVGLKDEKIIFTTNEGKTSVKKANIKTTKTSRTAKAKVSVSTKKPAKKTVKKKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 6e-178 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | YP_003830197.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0079 | Protein | 0.0 | 54 |
| clpC | YP_003830197.1 | ATP-dependent Clp protease ATP-binding subunit ClpC | VFG0080 | Protein | 4e-144 | 50 |
