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Name : lysS (bpr_I2757) Accession : YP_003832071.1 Strain : Genome accession: NC_014387 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 3309789 - 3311360 bp Length : 1572 bp Strand : - Note : - DNA sequence : GTGGCAGATAATAATCAGCAGAACAATCAGCAGAATGCACCTGCAGAGGACGTTGGACGTCTTCGTCAGGTACGTAGGGA CAAGCTCTCTGAGCTTCAGGCAGCAGGCAAGGATCCTTTCCAGATTGTTAAATATGACCAGACACATCATACACAGAACG TCAGAGATAACTTTGAGGCATTGGAGTTTGTGCCTCCAGTAGACGAGGAAGGCAAGGCAGTTGTAGTACCTCTTTCAGAA GTACCTGCTGACAAGGTTGTTTCTCTTGCAGGACGTATGATGTCCAAGCGTGTAATGGGTAAGGCATCTTTTGCTAATCT TCAGGACAGAGATGGCCGTATGCAGCTCTATGTTTCCAGAAATGATCTTGGAGACGAGGCTTATGCTGATTTCAAGAAAA TGGACATCGGAGATATCATCGGTGTTAAGGGATTTGCTTTCAGAACCAAGACAGGTGAGATCTCAGTTCATGTTAAAGAG CTGACTCTTTTATCCAAGTCACTTATGCCACTTCCAGAGAAGTTCCACGGACTTACAGATACAGAGATTCGTTATAGACA GAGATATGTTGACCTTATCATGAATGAAGATGTTAAGGAAACTTTCAAGAAGAGATCAGCTATCCTTCGTGAGATTCGTA ACTTCCTTGCTGATAGAGACTTCCTTGAAGTTGAGACTCCTATGCTTGTTGAGAACGCAGGTGGAGCAGCAGCAAGACCT TTCATTACACATTATAATGCTCTTGATGAGGAGAGAAAGCTTCGTATCTCTCTTGAGCTCTACCTCAAGAGACTTATCGT TGGCGGCCTTGAGAGAGTATATGAGATTGGTCGTGTATTCAGAAACGAAGGTGTTGATACAAGACACAATCCTGAGTTCA CACTTATGGAGCTCTATCAGGCATATACAGATTATGAAGGCATGATGGAACTTACAGAGTCAATGTTCCGTTACCTCGCT GAGAAGGTGTGTGGTACAACACTCATCAAGTATGGCGACAACGAGATTGATCTCGGCAAGCCTTTCGAGCGTCTTACAAT GAACGATGCTATCAAGAAGTATGCAGGCATCGACTTTGATGCAGTTAAGACTGATGAGGAAGCTAAGGCTCTTGCCAAGG AGCACCACATTGAGTTTGAAGATCGTCACACTAAGGGCGATATCATCAACCTCTTCTTCGAAGAGTACTGTGAGAAGAAC CTGATCCAGCCTACATTTATCATGGATCATCCTCTTGCAATTTCTCCTCTTACCAAGAAGAAGCCTACAGATCCTGAGAA GGTTGAGCGTTTCGAGCTCTTCATCAATACTTGGGAGATGTGTAACGCATATTCAGAGCTTAACGATCCTATCGATCAGC GTGAGCGTTTCGCTGCTCAGGATGCTAACGCAGCAGCCGGCGACGAAGAGGCAGAGCACACAGATGAGGACTTCCTCAAT GCCCTTGAGATCGGTATGGCTCCTACAGGTGGTATCGGCTACGGTATTGACCGTCTCTGCATGCTACTTACAGATAGCGA GACCATCAGGGACGTTTTGCTCTTTCCAACCTTAAAATCTGTAAAGAAGTGA Protein sequence : MADNNQQNNQQNAPAEDVGRLRQVRRDKLSELQAAGKDPFQIVKYDQTHHTQNVRDNFEALEFVPPVDEEGKAVVVPLSE VPADKVVSLAGRMMSKRVMGKASFANLQDRDGRMQLYVSRNDLGDEAYADFKKMDIGDIIGVKGFAFRTKTGEISVHVKE LTLLSKSLMPLPEKFHGLTDTEIRYRQRYVDLIMNEDVKETFKKRSAILREIRNFLADRDFLEVETPMLVENAGGAAARP FITHYNALDEERKLRISLELYLKRLIVGGLERVYEIGRVFRNEGVDTRHNPEFTLMELYQAYTDYEGMMELTESMFRYLA EKVCGTTLIKYGDNEIDLGKPFERLTMNDAIKKYAGIDFDAVKTDEEAKALAKEHHIEFEDRHTKGDIINLFFEEYCEKN LIQPTFIMDHPLAISPLTKKKPTDPEKVERFELFINTWEMCNAYSELNDPIDQRERFAAQDANAAAGDEEAEHTDEDFLN ALEIGMAPTGGIGYGIDRLCMLLTDSETIRDVLLFPTLKSVKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-110 | 50 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 1e-78 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_003832071.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 3e-110 | 50 |
