Gene Information

Name : Acear_0876 (Acear_0876)
Accession : YP_003827475.1
Strain : Acetohalobium arabaticum DSM 5501
Genome accession: NC_014378
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : R : General function prediction only
COG ID : COG0325
EC number : -
Position : 948619 - 949317 bp
Length : 699 bp
Strand : +
Note : COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR011078:IPR001608; KEGG: cce:Ccel_0596 alanine racemase domain protein; PFAM: alanine racemase domain protein; SPTR: B6FYW0 Putative uncharacterized protein; PFAM: Alanine racemase, N-terminal domain

DNA sequence :
ATGTCAGAGATAAAAGACAATCTAAAACAGGTACAGAAGCGTATTGCAGCAGCTGCCAAAAGAGCTGGCAGAGATAGCGA
TGAAATAAAATTAGTTGCTGTGACAAAAACAAGAGGTATTGAAGAGATCAAAGAAGTAATAGAAGCAGATGTAGTTGATT
TAGGTGAGAGTAGAGTTCAGGAACTGAGAGATAAGTATGATAATATAAGCCAGAAGATTAACTGGCATATGATAGGTCAC
TTACAGAGGAATAAAGTTAAGTATATAATGAGAATGGAGCGGTGTAATCTGATCCATTCTATGGATAGCATGCGATTAGC
CAAGAAGATAAATAAGAGGGCTGGAATGGCAGATAGAGTGATGAATGTTCTAGTCCAGATTAATGTTGCCGGTGATGAGA
ATAAGTTCGGCTTAGAACCGGAAGAGACTATCGATTATCTAAGAAAGGTAGCAGAGTTTGAGAATCTGCAGGTTAAGGGT
TTGATGACTATGGTACCTTATGTAGATGATACTGAGCAGGTAAGGCCTTACTTTAGAGAGTTAAAAGAACTATTTGAAGA
AGTTAAAAGGGCTGAGATTCCTAATATAGAAATGCAGGAGCTGTCAATGGGAATTACTAATGATTTTGAAGTAGCTATTG
AAGAAGGAGCAACTATTGTTAGAGTTGGTTCGGCTATCTTTGGACCGCGGGAGTATTAA

Protein sequence :
MSEIKDNLKQVQKRIAAAAKRAGRDSDEIKLVAVTKTRGIEEIKEVIEADVVDLGESRVQELRDKYDNISQKINWHMIGH
LQRNKVKYIMRMERCNLIHSMDSMRLAKKINKRAGMADRVMNVLVQINVAGDENKFGLEPEETIDYLRKVAEFENLQVKG
LMTMVPYVDDTEQVRPYFRELKELFEEVKRAEIPNIEMQELSMGITNDFEVAIEEGATIVRVGSAIFGPREY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-37 43
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-37 43
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 1e-37 43
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 1e-37 43