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Name : Acear_2111 (Acear_2111) Accession : YP_003828666.1 Strain : Acetohalobium arabaticum DSM 5501 Genome accession: NC_014378 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 2213876 - 2215726 bp Length : 1851 bp Strand : - Note : COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869:IPR016040; KEGG: cno:NT01CX_1779 polysaccharide biosynthesis family protein; PFAM: polysaccharide biosynthesis protein CapD; SPTR: A0PZQ0 polysaccharide biosynthesis protein superfam DNA sequence : TTGATTGACTTATTGCTAAAACTATATAAAAAGCCTAGATTAATAATCATCGACCTATTATTGATTAACCTAGCCTTAAT CCTCGGTTTTGTCTTGAGATTCGACAGTAACTGGTTAAGCCACTTTAGCTATTCTTATTCAGTCATTGTATCAATTATTG GATTAATCATTCTATACTTTTCTGGCTTATATAAGAAGATGTGGCACTATGCCAGTATTAATGAATTAAAGTCTATCATT AGAATAGTTGCTTTAATTAATCTATCCTTTACTCTTTATATATTTTTAGCCCAGATCAGCTTTTCACGCAGCGTTATCAT TATTAGCGGAGTATTGAATATTCTATTCTTAGGCGGTTTAAGATTTCTTCTTCGGTTAATTAAAGACTATCTCGAATATG AAAGATGTGATGGTGCTGATACCAAGGTCTTAATTGTAGGTGCCGGCGATGCAGCAGAGATTCTAATTCGTGAAATGTAC AAGCATCCGGAGCTGGAAAAGGAGATTGTAGGCTTAGTTGATGATGATCCGGAGAAGTTAGGACTGGAGATTCACGGTAA GAAGGTATTGGGGGACCGCTATGATATTCCTGATATCATAGAAGAATATGATGTTTGTGAAGTAATTATAGCCATTCCCT CTACGGCTGGTGAGGCTATTGAGAAGATCTATGATTTAAGCAATCAGGATGGAGTCGAGATCAAGATAGTGCCCGGTTTA AATGAGATTATCAATGACGGCTTTAATCTGAATCAGATTCGGGAAGTTGGAGTTGAGGACTTACTCAGAAGAGAACAGGT AGATCTGAATACAGATCAGATCTGTTCCTACCTCAAGGATAAAACAGTCCTGGTTACCGGTGGCGGAGGTTCGATCGGTT CGGAGCTATGTCGCCAGATAGCTCACTTTAGTCCTGAAAGGCTGATTATTTTCGATATCTCCGAGAATAATACATACTTT ATTGATTTGGAATTAAAGGAAAAGTTCAATAACTTAGAGATTATTCCAGTAATCGGCAGTATTCAGGATAAACATAAATT AGAGCAGACCTTTGAACGGTATCAGCCCGATGTAGTCTTCCATGCGGCGGCTCACAAACATGTTCCGCTAATGGAGCATA ATCCTGAAGAGGCAGTGAAGAATAATATCTTCGGTACTAAAAGATTAGCAGAAACAGCAGATGAATGTAATGTTGAACGA TTCGTCTTAATTTCTACCGATAAAGCAGTCAATCCTACTAATGTGATGGGCTCGACTAAACGGACTGCGGAAATGATAAT CCAGGGTCTTAATAAAGAGAGTAAGACTAAATTTATGGCCGTTAGATTCGGTAATGTGCTGGGGAGTAAAGGAAGTGTCA TTCCTCTCTTCAAGCGGCAGATTGCCCAGGGCGGCCCAGTGACAGTTACTCATAAGGAAGTAGAGAGATACTTCATGACG ATTCCCGAAGCAGCCCAATTAGTCATTCAGGCCGGCTCTCTCGGCACAGGAGGCGAAGTATTTGTCCTCGATATGGGTGA GCCTGTAAAGATTATAGATCTAGCTAAAGACTTAATTAAACTATCCGGTTTAGAAGTAGGGGAGGATATAGAGATAGAAA TCATAGGCCTACGCCCCGGAGAAAAGCTATCCGAAGAGCTGCTATATGATGATGAAAATACCATCTCTACTGATCATGAC CGGATCTTCATTACTAATTTAAATGGAGTTAGTCAGGAAAGCCTGAATAGTAAATTGGACAGGTTGAAAAAAGTAGTCAA GCTAAGTGATTCATCAGCAATTATCAAGTCTTTAGTTGAACTAATCGGTACATACAAGCCTAATAGAGATAACATAAAAG AAATAAGTTAA Protein sequence : MIDLLLKLYKKPRLIIIDLLLINLALILGFVLRFDSNWLSHFSYSYSVIVSIIGLIILYFSGLYKKMWHYASINELKSII RIVALINLSFTLYIFLAQISFSRSVIIISGVLNILFLGGLRFLLRLIKDYLEYERCDGADTKVLIVGAGDAAEILIREMY KHPELEKEIVGLVDDDPEKLGLEIHGKKVLGDRYDIPDIIEEYDVCEVIIAIPSTAGEAIEKIYDLSNQDGVEIKIVPGL NEIINDGFNLNQIREVGVEDLLRREQVDLNTDQICSYLKDKTVLVTGGGGSIGSELCRQIAHFSPERLIIFDISENNTYF IDLELKEKFNNLEIIPVIGSIQDKHKLEQTFERYQPDVVFHAAAHKHVPLMEHNPEEAVKNNIFGTKRLAETADECNVER FVLISTDKAVNPTNVMGSTKRTAEMIIQGLNKESKTKFMAVRFGNVLGSKGSVIPLFKRQIAQGGPVTVTHKEVERYFMT IPEAAQLVIQAGSLGTGGEVFVLDMGEPVKIIDLAKDLIKLSGLEVGEDIEIEIIGLRPGEKLSEELLYDDENTISTDHD RIFITNLNGVSQESLNSKLDRLKKVVKLSDSSAIIKSLVELIGTYKPNRDNIKEIS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-96 | 47 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-94 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acear_2111 | YP_003828666.1 | polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 2e-97 | 48 |
| Acear_2111 | YP_003828666.1 | polysaccharide biosynthesis protein CapD | VFG0029 | Protein | 1e-78 | 43 |
