|
Name : Acear_1774 (Acear_1774) Accession : YP_003828344.1 Strain : Acetohalobium arabaticum DSM 5501 Genome accession: NC_014378 Putative virulence/resistance : Virulence Product : type II secretion system protein E (GspE) Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1860964 - 1862661 bp Length : 1698 bp Strand : - Note : COGs: COG2804 type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482:IPR003593; KEGG: hor:Hore_05970 Tfp pilus assembly protein PilB; PFAM: type II secretion system protein E; General secretory system II DNA sequence : GTGATCAAAAAGAAACGGTTAGGGGATATTCTGGTTGATGTTGGATTTATTACTGAAGAAGAACTACAGGAGGCTTTAGA ACAGCAGAAGGGAACTGAAAAGAGGTTGGGTACTGTTCTAAAGGAGATGAAGCTGGTTACCGAACAGGATGTAATGGAGG CTTTAGAATATCAGTTAGGGATTCCACAGGTTAATCTCAATAAGTTCATTATTGATTCCGAGGTAATTAAGATGATTCCA CAGTCGCTGGCTGAAAGACATCGGGCAATTCCGATTAAGAAAGAGGATAATACTTTAACAGTTGCTATGGCTGATCCTCT CGATGTACTGGCTATTGATGATATTAGAATTAAGACTGACTGTGAAGTAATACCGGTGATTGCCAGTGAAGATGAGATTC AGCAGGCTATAGAACAGTATTTTGGCAGCGAAGATATAGTTAATGAATTTATTGAGGATATAGATGCCCGACAGATAGAA CTTGACAGTGAGGAAGAGATGGAAGTAGACCGGCTGCGCGAGATGGTAGATGAGGCGCCGGTAGTTAGATTAGTAAATAA TATTATCAATGAAGGAGTTAAGCTGCGGGCCAGCGATATTCATATAGAGCCTCAGGGAGATGAAGTGCAGGTTAGATATA GAGTCGATGGTATTCTGCGAAATGAAATGGATATTCCCAAGCATACTCATTCTGCTTTAGTTTCTAGAATTAAGATTATG GCTGACATGGATATTGCTGAGCGGCGCAGACCTCAAGACGGCAGAATTCAGATGATGATCAGGGATAAAGAGATAGATCT TCGAATTTCGGTTCTGCCGACGATAGAGGGTGAGAAAGTAGTAATCAGGATTTTAGATAAGGATAATCTGATGCTGGAGC TTAATGAGTTAGGATTCTTACCTGAGCATTTAACAGACTTTAAATCTATGATTCAACAGCCCCACGGGATGTTATTGATT ACTGGTCCAACCGGCAGCGGCAAGACAACGACGCTTTATTCGGCACTTAATCGGTTGAATACAGAAGAGAAGAATATTAT TACTATTGAAGATCCAGTTGAGTATACTCTGAACGGAATCAATCAGGTTCAGACCAATCCCCAAGTAGGACTTACTTTTG CTGATGGACTTCGATCTATTCTCCGGCAGGATCCGGATATAGTGATGGTTGGTGAGATTCGGGATAAAGAGACGGCAGAG ATTGCTATTCATGCTGCACTAACGGGACATTTAGTCTTAACTACTCTCCATACTAATGAAGCTGCGGGGGCCTTAACGAG ACTGATCAATATGGGAATTGAACCTTTCTTAGTTGCTTCTTCAGTTATCGGTGTTGTTGCTCAGCGGCTGGTTAGAACTA TCTGTGATAACTGTAAGGCTAAGGACGAAGAATTGGCAGTTGATTTTAATTTAGGTAAGTATATAGATGGTGAGGAAGTA TTGGAAATCTATGAAGGAGATGGCTGCCGCCGATGTAATGAGCGGGGCTATTTAGGTAGAACAGCGATTCATGAGATTTT GGAGATTGATTCTGAGATTAAGAAGTTGATTGTTAAGAAAGCTTCGGCTGCTGAGATTGAAGAGCAGGCGGTAAACAATG GTATGATTACATTGGAGTCTTCAGGCTTAGAGAAGGTTAATCAGGGGATTACTACTTTAGAAGAGGTTATGAGAGTAACC AAAGTCTATGTAGATTAG Protein sequence : MIKKKRLGDILVDVGFITEEELQEALEQQKGTEKRLGTVLKEMKLVTEQDVMEALEYQLGIPQVNLNKFIIDSEVIKMIP QSLAERHRAIPIKKEDNTLTVAMADPLDVLAIDDIRIKTDCEVIPVIASEDEIQQAIEQYFGSEDIVNEFIEDIDARQIE LDSEEEMEVDRLREMVDEAPVVRLVNNIINEGVKLRASDIHIEPQGDEVQVRYRVDGILRNEMDIPKHTHSALVSRIKIM ADMDIAERRRPQDGRIQMMIRDKEIDLRISVLPTIEGEKVVIRILDKDNLMLELNELGFLPEHLTDFKSMIQQPHGMLLI TGPTGSGKTTTLYSALNRLNTEEKNIITIEDPVEYTLNGINQVQTNPQVGLTFADGLRSILRQDPDIVMVGEIRDKETAE IAIHAALTGHLVLTTLHTNEAAGALTRLINMGIEPFLVASSVIGVVAQRLVRTICDNCKAKDEELAVDFNLGKYIDGEEV LEIYEGDGCRRCNERGYLGRTAIHEILEIDSEIKKLIVKKASAAEIEEQAVNNGMITLESSGLEKVNQGITTLEEVMRVT KVYVD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-86 | 50 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-86 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Acear_1774 | YP_003828344.1 | type II secretion system protein E (GspE) | VFG2048 | Protein | 3e-86 | 49 |
| Acear_1774 | YP_003828344.1 | type II secretion system protein E (GspE) | VFG0182 | Protein | 2e-85 | 47 |
| Acear_1774 | YP_003828344.1 | type II secretion system protein E (GspE) | VFG1876 | Protein | 3e-83 | 45 |
| Acear_1774 | YP_003828344.1 | type II secretion system protein E (GspE) | VFG2426 | Protein | 1e-74 | 43 |
| Acear_1774 | YP_003828344.1 | type II secretion system protein E (GspE) | VFG1880 | Protein | 3e-89 | 43 |
| Acear_1774 | YP_003828344.1 | type II secretion system protein E (GspE) | VFG0112 | Protein | 7e-89 | 42 |
