Gene Information

Name : Acear_1628 (Acear_1628)
Accession : YP_003828199.1
Strain : Acetohalobium arabaticum DSM 5501
Genome accession: NC_014378
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 1727490 - 1728263 bp
Length : 774 bp
Strand : -
Note : COGs: COG1338 Flagellar biosynthesis pathway component FliP; InterPro IPR005838:IPR005837; KEGG: hor:Hore_16720 flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; SPTR: B8CYQ3 Flagellar biosynthetic protein FliP

DNA sequence :
ATGATTAATAAGAGATGGAAATTTATCTTTAAGGTTTCAATATTATTACTACTAATAATTATTAGTAGCCAGGGTATAGT
TGAAGCAGCACCTACTTTTGAGATACCTGATGTCAATTTAAGTATTGAAACCGGAGAGGGAAGCCAGAATCTAGCTTTAC
CACTGCAGATTATGCTGTTGTTGACCGTGTTATCATTAGCACCGGCAATTTTAATTATGTTAACGTCTTTTGTGCGGATT
GCTGTGGTGTTATCTTTAATTAGACGAGCTTTGGCAACCAGAAGGATGCCTCCTAATCAGGTTATTATTGGGTTAGCAAT
CTTTTTAACTATCTTTGTAATGGCACCTGTCTGGGGCCAGATTTATGATACTGCAGTACAACCTTATTTGGATGATGAAA
TCAATCAGATGCAGGCTTATGAGCAGGGGATTAAGCCGTTAAGGAAATTCATGTTTAAGCAGACTCGAGAGAAGGATATT
GCTTTATTTGTTGATTTAGGTGAAATAGAGCGGCCTCAAAACCAAATGGAGATTCCGACTTATGTCCTGATTCCTGCTTT
TATTATTAGCGAATTGAGAATAGCTTTTCAGATCGGATTTATAATCTATCTTCCCTTTATAGTGATTGATATGATAGTTG
CCAGTACTTTAATGTCCATGGGAATGATGATGTTACCTCCGGTAATGATTTCACTTCCCTTTAAGATATTACTCTTTGTA
TTAGTTGACGGCTGGTATTTGGTAATTAAATCGCTAATTAAGACTTTTAATTAA

Protein sequence :
MINKRWKFIFKVSILLLLIIISSQGIVEAAPTFEIPDVNLSIETGEGSQNLALPLQIMLLLTVLSLAPAILIMLTSFVRI
AVVLSLIRRALATRRMPPNQVIIGLAIFLTIFVMAPVWGQIYDTAVQPYLDDEINQMQAYEQGIKPLRKFMFKQTREKDI
ALFVDLGEIERPQNQMEIPTYVLIPAFIISELRIAFQIGFIIYLPFIVIDMIVASTLMSMGMMMLPPVMISLPFKILLFV
LVDGWYLVIKSLIKTFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lscR AAO18040.1 LscR Virulence TTSS locus Protein 4e-26 42
escR AFO66317.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-24 41
escR AFO66400.1 putative LEE-encoded type III secretion system factor Virulence SESS LEE Protein 2e-24 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acear_1628 YP_003828199.1 flagellar biosynthetic protein FliP VFG2016 Protein 6e-46 51
Acear_1628 YP_003828199.1 flagellar biosynthetic protein FliP VFG2494 Protein 1e-48 51
Acear_1628 YP_003828199.1 flagellar biosynthetic protein FliP VFG2338 Protein 3e-45 50
Acear_1628 YP_003828199.1 flagellar biosynthetic protein FliP VFG1259 Protein 6e-47 49
Acear_1628 YP_003828199.1 flagellar biosynthetic protein FliP VFG0394 Protein 1e-28 42
Acear_1628 YP_003828199.1 flagellar biosynthetic protein FliP VFG0044 Protein 5e-27 41