Gene Information

Name : Acear_0131 (Acear_0131)
Accession : YP_003826747.1
Strain : Acetohalobium arabaticum DSM 5501
Genome accession: NC_014378
Putative virulence/resistance : Virulence
Product : ATPase AAA
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 146355 - 148796 bp
Length : 2442 bp
Strand : +
Note : COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR018368:IPR001270:IPR004176:IPR003959:IPR 001943:IPR013093:IPR019489:IPR003593; KEGG: hor:Hore_00870 ATPase AAA; PFAM: ATPase AAA; Clp domain protein; ATPase AAA; UvrB/UvrC protei

DNA sequence :
ATGATTTTTGGTCGCTTTACAGAAAGAGCTAGAAAGGTATTAGTCTTAGCCCAGGAAGAAGCTAAGGATTTAGGCCATAG
TTATGTAGGTACGGAACACCTATTATTAGGTTTAATATCAGAAGGAGAAGGCATTGCCAGTAAAACATTGGAAGATTTTG
ATCTTAAATCAGAAGAGTTAAAAGTAGAGGTTAATAAATTAATCGGTGACAAAGGCAGTCCAGTACAAGCAGATAAGCTG
AACTTTACGCCGCGTACTAAAAAGGTTTTAAACTTAGCAATGGAAGAGGCTAGACGATTAGGACAGAATTATATCGGAAC
TGAACATCTTTTATTGGGATTGGTTAAAGAAGGTGAAGGAGTAGCAGCAAGAGTCTTGAAGAATTCAGGAGTAGAACTGG
ATAAATTACGAAAGAAGATCATGAATGAATTAGGAACTACAGAGAAAGCAGGTAAATTTAATCAACAAGGCAGAAAACGA
AATAGTAATACTCCTACGCTGGATGATTTCAGTCGTGATCTAACTGCTTTAGCTGAAGAGGAAAAATTAGATCCAGTAAT
TGGTCGAAAACAGGAGATACAGCGAGTAATTCAGGTGTTAAGTAGAAGAAAGAAGAATAATCCTTGCTTAATTGGGGAAC
CGGGAGTAGGTAAAACAGCTATTGCTGAAGGTTTAGCACTGATGATTGCTAACGATGATGTTCCGGAAACATTGACTGAT
AAGCGGGTATTGGCTTTGGATTTAAGTTCATTAGTAGCAGGTTCTAAATATAGAGGAGAATTTGAAAAGCGGTTAAAAGC
AGTTATGAATGAGATTAATGAAGCCGGTGACATAATCATCTTTATTGATGAACTCCATAATTTAGTTGGAGCTGGCGGGG
CTGAAGGAGCTATTGATGCAGCTAATATTCTAAAACCGGCTCTTGCGCGAGGAGAACTACAGTGTATTGGAGCTACTACT
TTAGATGAATATCGCAAGCATATTGAAAAGGATTCTGCATTAGAAAGAAGATTCCAGTCTGTATTAGTTGAAGAGCCGTC
TATAGAAGAAACAGTATCAATCTTAGAAGGTCTGCGTGATGTCTATGAAGCCCACCATCGGGTAAAAATTACTGACGAAG
CTATTAAGGCAGCTGCTAATCTCTCACATCGATATATTACTGATCGCTTCTTGCCTGATAAGGCAATAGATTTGGTAGAT
GAAGCAGGATCTAAAATAAGGTTACAGGATAATACAGTTCCATCTGAAATTAAAGAGTTAAATAAAGAATTGGAAAGTGT
TGAAAAGGAGAAGGAAGCTGCTGTTAAAGCCCAGGAATTCGAAAAGGCTGCTAACCTGAGAGATAAAGAGAAGCAGTTAA
AAGAGGAATTAGAAGAAACTAAATCAGAATGGAAAAATCAGAAGGGGAGAGATGAATCTCTAATTACCAAAGAAGATATT
GCTGAAATTGTCTCTGACTGGAGCGGAGTGCCGGTAACTAAACTGACTGAAGATGAATCTAAAAAATTACTGCGTTTAGA
AGAAGAGTTACATGAAAGAATTGTGGGCCAGGATGAAGCTATTGAGGCTGTATCCCAAGCAGTCCGCCGAGCTAGAGCAG
GACTTAAGGATCCTAAGCGGCCTATCGGTTCCTTTATCTTCTTAGGGCCTACTGGTGTAGGTAAGACAGAGCTGGCAAAG
ACATTAGCTGAAGCAATGTTCGATGATGAGGAAGCTATGATTAGAATTGATATGTCTGAATATATGGAAAAGCATGCTGT
TTCTAGATTAGTAGGAGCACCTCCAGGATATGTAGGCCATGAAGAGGGAGGACAGTTAACTGAACAGGTAAGACGCCAAC
CTTTCTCTGTAATCTTATTGGATGAGATTGAGAAAGCCCATCCGGAAGTCTTTAATATGCTGCTGCAGGTTTTAGAGGAT
GGCCAGTTGACGGATTCTCAGGGCAGAACTGTAGACTTTAAGAATACAATCATTATTATGACTTCTAATGTTGGAGCCAA
TTTAATTGAGAATCAGTCCGGTGTCGGTTTTACACCTAGTGAGAAGAATGCTGAAACTTCTTATCAGCGGATGAAAGAAA
AGGTAACTTCTGAACTGAAGAAACAGTTTAGACCTGAATTCTTAAACCGGCTGGATGAAACAATTGTCTTCCATGCTTTA
GAGTTAGAGCATATTAAGGAGATTATTGATTTGATGTTAGAAGAGGTGTTTGAGCGGTTAGATGAGAAAGAGATTACAAT
AGAAGTAACTGATGATGCTAAAGAAGTTATTGCTGAAAAAGGATTTGATAAAGAGTTTGGCGCTAGGCCGCTAAAACGGA
CTATTCGCCGGATGATGGAGAATCCTCTGTCGGAAAAATTAATAGCTGGTGAATTCAGTGATGGTGATCACATTGTAGTG
GATGTTGATGAAGAAGAAAATCTAACCTTCATTGAAGCATAA

Protein sequence :
MIFGRFTERARKVLVLAQEEAKDLGHSYVGTEHLLLGLISEGEGIASKTLEDFDLKSEELKVEVNKLIGDKGSPVQADKL
NFTPRTKKVLNLAMEEARRLGQNYIGTEHLLLGLVKEGEGVAARVLKNSGVELDKLRKKIMNELGTTEKAGKFNQQGRKR
NSNTPTLDDFSRDLTALAEEEKLDPVIGRKQEIQRVIQVLSRRKKNNPCLIGEPGVGKTAIAEGLALMIANDDVPETLTD
KRVLALDLSSLVAGSKYRGEFEKRLKAVMNEINEAGDIIIFIDELHNLVGAGGAEGAIDAANILKPALARGELQCIGATT
LDEYRKHIEKDSALERRFQSVLVEEPSIEETVSILEGLRDVYEAHHRVKITDEAIKAAANLSHRYITDRFLPDKAIDLVD
EAGSKIRLQDNTVPSEIKELNKELESVEKEKEAAVKAQEFEKAANLRDKEKQLKEELEETKSEWKNQKGRDESLITKEDI
AEIVSDWSGVPVTKLTEDESKKLLRLEEELHERIVGQDEAIEAVSQAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELAK
TLAEAMFDDEEAMIRIDMSEYMEKHAVSRLVGAPPGYVGHEEGGQLTEQVRRQPFSVILLDEIEKAHPEVFNMLLQVLED
GQLTDSQGRTVDFKNTIIIMTSNVGANLIENQSGVGFTPSEKNAETSYQRMKEKVTSELKKQFRPEFLNRLDETIVFHAL
ELEHIKEIIDLMLEEVFERLDEKEITIEVTDDAKEVIAEKGFDKEFGARPLKRTIRRMMENPLSEKLIAGEFSDGDHIVV
DVDEEENLTFIEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acear_0131 YP_003826747.1 ATPase AAA VFG0079 Protein 0.0 62
Acear_0131 YP_003826747.1 ATPase AAA VFG0080 Protein 3e-146 50