Gene Information

Name : Acear_1419 (Acear_1419)
Accession : YP_003827994.1
Strain : Acetohalobium arabaticum DSM 5501
Genome accession: NC_014378
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : 3.6.1.-
Position : 1517861 - 1520242 bp
Length : 2382 bp
Strand : -
Note : COGs: COG1200 RecG-like helicase; InterProIPR016027:IPR004609:IPR014021:IPR001650:IPR 004365:IPR011545:IPR014001:IPR019793; KEGG: hor:Hore_10120 ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRN

DNA sequence :
ATGGCTGATAAGGAAGAGATTTTACAGAAATTATTGAAGCCGGTTGGAATTGAAAAGAAGGCTGGCTATAATAATTCTTC
TGTTTTTGGTGGATTTGATAATTATATTCTGCAGTGGCTTGATAGGCTGGCTGAATTAAGCAGTGATGAGCGAGTATTAG
AATTAATAGCTGATTTAAAAGAACTTTTTTCTGATTACTCCCGGGTTCAGATAAAACAGAGACAGAAAAAATTGGCGGCT
GGGCAGGAATTATTTAACAGTTTATCTAATTTAATCCAAGAGGAAACAGTCGAAGAGGATTCTATGCAGCGGTTACCCCC
AATCTGGCAGAAATCGATCCGATATGTCAAGGGTGTCGGCAAGAAGCGGGCTGAGAAGTTAGCTAGATTAGAGATAGATA
CTCTGCGGGATATGTTATTCTATATTCCGCGTGATTATCGGGATTGGAGTAAGAACCTTCCTATTAGAGAGTTATCCCCG
GACAGTGAAGTGACTGCAACAGGTCAGGTAGTTGATTCTACTGAGCTCCGTCCGCGTAAAGGATTGACAATTACTAAAGT
GATTATCAGTGATAATACCGGGCGGCTGGCTGGAGTATGGTTTAATCAGTCCTATATTAAGCAGAAGTTTAAGCCGGGAA
TGGCGGTATCCTTTAGCGGTGAAGTAAAGCAGGAGTATGGAGAATTACAGATTACTCATCCCCATTATGAAATAATGGAT
AGCGATAAAGAGTTAGATCCAGGTAAGATTCTGCCGGTCTATTCGACTACGCAGGGTTTAAGCCAGAATCTACTGCGAAA
GATAGTGAGCAGAATTTTAAAAGAACATCTAGATCGGTTTCCTGAGTCATTATCTCCGGGAATAAAGGATAAGTATGATC
TGTTGGATGTTAAAGAAGCACTTTATAAGATACATTTTCCTGATCAGATTCGGGAGGTAAAAGAGGCTAGACAAAGATTG
GCCTTTGGTGAATTATTTATTTTACAGCTGGGAATTCTGTTAAAGAAGACTGATCTTTTAACAGAAGAGGAAGGTCTTGT
ACATACCGGAAGTGATGAATTAATTACTAATTTTTTATCGGATTTACCTTTTGAATTAACTTCTGCTCAGCGTAGAGTCT
GGGCGGAGATTAAGGATAATCTTGAAAGCAGTATCGTGATGAATAGATTAGTGCAGGGCGATGTAGGTTCGGGAAAGACT
GTGGTGGCTACTTTAGCCTTACTTAAGGCTGTAAGCAGCGGTTATCAGGGAGCTATGATGGCTCCTACGGAGATTCTGGC
TGAGCAGCATTACTTAAGTCTAAAGGAGTCATTAGAGGAGTATGGACTACAGATAGGATTATTGGTAGGGAGCCTAAAGA
AGAGTGAACGAAAAGAAGTAATTGCCGGCATTGAGAGCGGTGAAGTGGATATAGTTATTGGGACTCATGCTTTGCTTCAA
GAAGAGGTCAGCTTTGCCAAGTTGGGGCTGGTAATTACTGATGAACAGCATAGATTCGGCGTTAGACAGCGGGCTATTCT
CAAGGAGAAGGGTGAGAATCCTGATGTGCTGGTTATGACGGCTACTCCGATTCCGAGAACATTAGCTCTAACGCTGTATG
GTGATCTTGATCTGTCGGTAATTGATGAACTGCCGCCGGGCAGAAAGCCGGTGATAACTGAATGGAGAAGAGAGAAGGAT
TTTGATAAGATCTTTGATTTTATCCGGCAGGAGGTCAAGTCGGGACGGCAGGCCTATATAGTCTGTCCGTTAGTAGAAGA
ATCGGAGGAGCTGGATGTTAGATCGGCTGAAAATATGGCTGAGAAACTGGATGAGGATATCTTTCCGGAGTTTAAGATTG
GTCTATTACACGGTCAGTTAAAGACGGACGAGAAGGAAGCGGTAATGGAGGGCTTCCGCAGCCAGCAGATCGATATTTTA
GTCTCTACTACTGTAATTGAAGTAGGAGTCGATGTAGCCAATGCTACGCTGATGGTTATTCTTGATGCGCAGCGCTTTGG
TTTGGCCCAGCTCCATCAGCTGCGGGGCAGAGTCGGCAGAAGTGAGTATCAGTCTTATTGTATTCTAGTTGCTGATCCTG
GAACTGAGACTGGTAGAGAGCGGATGAAGATTATGACTCAGTCCACTGACGGTTTTGTGATTGCTGAGGAGGATCTGCAG
CTTAGAGGACCGGGTGAGTTCTTTGGTACCCGCCAGCATGGGCTGCCTGATCTGGAGGTGGCTGATCTGCTGCGGGATAG
TAGGCTAGTGGAGCTAGCCCGAAAGGAAGCCAGAAAAGTAGTAGACAGCGATCCTAAACTACAGCAGGAGGAGCATCAAC
TGCTGGCTGATCTGCTTCAGGCTAAGTTTGGGGATGGTTTTGAGCTAATAGATGTTAGTTAA

Protein sequence :
MADKEEILQKLLKPVGIEKKAGYNNSSVFGGFDNYILQWLDRLAELSSDERVLELIADLKELFSDYSRVQIKQRQKKLAA
GQELFNSLSNLIQEETVEEDSMQRLPPIWQKSIRYVKGVGKKRAEKLARLEIDTLRDMLFYIPRDYRDWSKNLPIRELSP
DSEVTATGQVVDSTELRPRKGLTITKVIISDNTGRLAGVWFNQSYIKQKFKPGMAVSFSGEVKQEYGELQITHPHYEIMD
SDKELDPGKILPVYSTTQGLSQNLLRKIVSRILKEHLDRFPESLSPGIKDKYDLLDVKEALYKIHFPDQIREVKEARQRL
AFGELFILQLGILLKKTDLLTEEEGLVHTGSDELITNFLSDLPFELTSAQRRVWAEIKDNLESSIVMNRLVQGDVGSGKT
VVATLALLKAVSSGYQGAMMAPTEILAEQHYLSLKESLEEYGLQIGLLVGSLKKSERKEVIAGIESGEVDIVIGTHALLQ
EEVSFAKLGLVITDEQHRFGVRQRAILKEKGENPDVLVMTATPIPRTLALTLYGDLDLSVIDELPPGRKPVITEWRREKD
FDKIFDFIRQEVKSGRQAYIVCPLVEESEELDVRSAENMAEKLDEDIFPEFKIGLLHGQLKTDEKEAVMEGFRSQQIDIL
VSTTVIEVGVDVANATLMVILDAQRFGLAQLHQLRGRVGRSEYQSYCILVADPGTETGRERMKIMTQSTDGFVIAEEDLQ
LRGPGEFFGTRQHGLPDLEVADLLRDSRLVELARKEARKVVDSDPKLQQEEHQLLADLLQAKFGDGFELIDVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 8e-94 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Acear_1419 YP_003827994.1 ATP-dependent DNA helicase RecG BAC0356 Protein 6e-112 44