Gene Information

Name : Toce_0480 (Toce_0480)
Accession : YP_003824880.1
Strain : Thermosediminibacter oceani DSM 16646
Genome accession: NC_014377
Putative virulence/resistance : Virulence
Product : UDP-glucose pyrophosphorylase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : 2.7.7.9
Position : 479066 - 479977 bp
Length : 912 bp
Strand : +
Note : COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005771:IPR005835; KEGG: tte:TTE0732 UDP-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; SPTR: UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransfer

DNA sequence :
GTGAAAATAAAAAAAGCCGTCATACCTGCCGCTGGCCTCGGTACCCGGTTTCTTCCGGCAACCAAGGCCCAGCCCAAAGA
GATGCTGCCGATAGTGGATAAGCCCACTATCCAGTACATAGTGGAAGAAGCGGTGGCCTCGGGCATCGAGGAAATCCTCA
TAATCACCGGCAGGAACAAGCGGGCCATCGAAGACCATTTCGACAAGTCGGTGGAACTGGAGCTGGAGCTGAAGAAAAAG
GGAAAAGGAGAACTATTGAGGGTAGTCGAGGAAATATCCAACATGGTGGACATCCACTACGTCCGCCAGAAGGAGCCCCG
AGGGCTGGGGCACGCCATCTACTGCGCCAGGACCTTCGTGGGCGACGAGCCCTTCGCCGTCATGCTGGGCGACGATGTTA
TGTGCTCAAAGGAACCGGTGCTGAAACAGATGATGGATATTTACGAGAGGTATAACTGCTCGATCCTGGGAGTCCAGCAG
GTTCCGGAAGACGACGTGAGCAAGTACGGAATTATAGACGGGGCCTTTATCGAGGACCGCATCTACAAGGTCAACAACAT
GATCGAAAAACCGAAAAAACAGGAAGCCCCCTCCCGCATGGCGATAATGGGGAGGTATATCATAACCCCTCGCATATTTG
AAATCCTGGAACATACAAAACCAGGGGCCGGGGGCGAGATCCAGCTTACCGATGCATTAAAAGAACTTTTAAACTATGAA
GTAATCTACGCCTATACCTTTGAAGGGAAAAGATACGACGTCGGGGACAAGCTGGGGTATCTTGTGGCTACCGTGGAATT
TGCCCTGAAAAGGGAAGAACTCCGGGATGAGTTTAGAAAATACCTGCTCGGCCTGCTGGCGGAGGATCAGGCCGGGTACT
GCGAAGCGGCTGCGGGGAAAAATTCGGACTGA

Protein sequence :
MKIKKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIVEEAVASGIEEILIITGRNKRAIEDHFDKSVELELELKKK
GKGELLRVVEEISNMVDIHYVRQKEPRGLGHAIYCARTFVGDEPFAVMLGDDVMCSKEPVLKQMMDIYERYNCSILGVQQ
VPEDDVSKYGIIDGAFIEDRIYKVNNMIEKPKKQEAPSRMAIMGRYIITPRIFEILEHTKPGAGGEIQLTDALKELLNYE
VIYAYTFEGKRYDVGDKLGYLVATVEFALKREELRDEFRKYLLGLLAEDQAGYCEAAAGKNSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 4e-71 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Toce_0480 YP_003824880.1 UDP-glucose pyrophosphorylase VFG0964 Protein 3e-71 53