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Name : Toce_2236 (Toce_2236) Accession : YP_003826570.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Virulence Product : two component transcriptional regulator, winged helix family Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 2237886 - 2238575 bp Length : 690 bp Strand : - Note : COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cth:Cthe_2333 two component transcriptional regulator; PFAM: response regulator receiver; transcriptiona DNA sequence : ATGGGTCAAAAGATACTGGTGGTGGACGACGAAAAGCCCATAGTCGATATACTGAAATATAATCTTGCCAAGGAAGGATA CGAAGTAATCGCCGCTTACGACGGCGAAGAGGCAATCGAGGTAGCCTTTTCCCAAAACCCGAACCTCATACTGCTGGATG TAATGCTGCCCAAGCAGGACGGATTTCAGGTGTGTAAGAAGTTGAGGGAAAAACTCGCCTGTCCCATCATCATGCTGACA GCTAAGGGTGAGGAAGTGGACAAGGTCCTGGGCCTGGAGCTCGGGGCTGACGATTACGTAACCAAGCCCTTCGGCATGAG GGAGCTCATGGCCCGGATTAAGGCAAACTTGAGGAGGCTGACGCTTTCAAATCCCGTTGAAGAACAAAAGCTATTGAAGG TGAAGGACCTGGAAATAGACCTTGCAAGCTTTCAGGTGAGAAAAAAGGGCAATACCTTGGAGCTCACCTTCAGGGAGTTC GAGCTTTTGAAATTCCTGGCCGCCCAGCCGGGGCAGGTTTTTTCAAGGGAAAAGCTATTAGAAGAAGTCTGGGGATACGA ATACTACGGCGATATCCGCACCGTCGACGTAACCATCAGGAGGCTCAGGGAAAAGATAGAAGATGACCCATCCAATCCCT CATATATAAAGACGAAGCGAGGGGTGGGATATTATTTTAACAGAAACTAG Protein sequence : MGQKILVVDDEKPIVDILKYNLAKEGYEVIAAYDGEEAIEVAFSQNPNLILLDVMLPKQDGFQVCKKLREKLACPIIMLT AKGEEVDKVLGLELGADDYVTKPFGMRELMARIKANLRRLTLSNPVEEQKLLKVKDLEIDLASFQVRKKGNTLELTFREF ELLKFLAAQPGQVFSREKLLEEVWGYEYYGDIRTVDVTIRRLREKIEDDPSNPSYIKTKRGVGYYFNRN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD42044.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 5e-31 | 41 |
| c3565 | NP_755440.1 | response regulator | Not tested | PAI I CFT073 | Protein | 8e-31 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_012469.1.7685629. | Protein | 1e-54 | 58 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_009641.5332272.p0 | Protein | 2e-48 | 55 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_013450.8614421.p0 | Protein | 2e-48 | 55 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_007793.3914279.p0 | Protein | 2e-48 | 55 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_003923.1003749.p0 | Protein | 2e-48 | 55 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_002745.1124361.p0 | Protein | 2e-48 | 55 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_009782.5559369.p0 | Protein | 2e-48 | 55 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_002951.3237708.p0 | Protein | 2e-48 | 55 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_002758.1121668.p0 | Protein | 2e-48 | 55 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_002952.2859905.p0 | Protein | 3e-48 | 54 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_007622.3794472.p0 | Protein | 3e-48 | 54 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | HE999704.1.gene2815. | Protein | 1e-45 | 54 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | AE016830.1.gene1681. | Protein | 1e-40 | 47 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_012469.1.7686381. | Protein | 1e-38 | 46 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | CP000034.1.gene3834. | Protein | 3e-26 | 46 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | AF155139.2.orf0.gene | Protein | 8e-35 | 46 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_002695.1.915041.p | Protein | 3e-26 | 46 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | AE000516.2.gene3505. | Protein | 4e-38 | 46 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_014475.1.orf0.gen | Protein | 1e-35 | 45 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | AM180355.1.gene1830. | Protein | 6e-37 | 45 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_005054.2598277.p0 | Protein | 1e-35 | 45 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | CP001138.1.gene4273. | Protein | 6e-26 | 45 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | BAC0533 | Protein | 6e-26 | 45 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | CP000647.1.gene4257. | Protein | 6e-26 | 45 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | CP001918.1.gene5135. | Protein | 1e-21 | 45 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | FJ349556.1.orf0.gene | Protein | 5e-36 | 44 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | CP000675.2.gene1535. | Protein | 4e-33 | 43 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | AF162694.1.orf4.gene | Protein | 3e-30 | 43 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | AF130997.1.orf0.gene | Protein | 1e-31 | 43 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | DQ212986.1.gene4.p01 | Protein | 1e-35 | 43 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | CP004022.1.gene3215. | Protein | 2e-30 | 43 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_003923.1003417.p0 | Protein | 2e-33 | 42 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | AE015929.1.gene1106. | Protein | 2e-27 | 42 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_013450.8614146.p0 | Protein | 2e-33 | 42 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_002951.3238224.p0 | Protein | 2e-33 | 42 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_007793.3914065.p0 | Protein | 2e-33 | 42 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_002758.1121390.p0 | Protein | 2e-33 | 42 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_010079.5776364.p0 | Protein | 2e-33 | 42 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_002952.2859858.p0 | Protein | 2e-33 | 42 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_007622.3794948.p0 | Protein | 2e-33 | 42 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | CP001485.1.gene721.p | Protein | 3e-28 | 42 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | BAC0125 | Protein | 1e-28 | 41 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | EU250284.1.orf4.gene | Protein | 1e-31 | 41 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | HE999704.1.gene1528. | Protein | 2e-29 | 41 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | CP000034.1.gene3671. | Protein | 8e-36 | 41 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | CP001918.1.gene3444. | Protein | 2e-28 | 41 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | BAC0039 | Protein | 1e-28 | 41 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | BAC0596 | Protein | 1e-27 | 41 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | CP000034.1.gene2186. | Protein | 1e-28 | 41 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | NC_002695.1.916589.p | Protein | 9e-29 | 41 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | CP001138.1.gene2239. | Protein | 1e-27 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | VFG1389 | Protein | 4e-24 | 42 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | VFG1390 | Protein | 3e-32 | 41 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | VFG1563 | Protein | 3e-31 | 41 |
| Toce_2236 | YP_003826570.1 | two component transcriptional regulator, winged helix family | VFG1702 | Protein | 3e-31 | 41 |
