Gene Information

Name : Toce_2192 (Toce_2192)
Accession : YP_003826527.1
Strain : Thermosediminibacter oceani DSM 16646
Genome accession: NC_014377
Putative virulence/resistance : Unknown
Product : NLPA lipoprotein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1464
EC number : -
Position : 2195717 - 2196553 bp
Length : 837 bp
Strand : +
Note : COGs: COG1464 ABC-type metal ion transport system periplasmic component/surface antigen; InterPro IPR004872; KEGG: tpd:Teth39_1334 YaeC family lipoprotein; PFAM: NLPA lipoprotein; SPTR: Lipoprotein, YaeC family; PFAM: NLPA lipoprotein; TIGRFAM: lipoprotei

DNA sequence :
ATGAAAAAGATTCTGGCAACGGTTTTAATACTGGGCCTAATAGCAGCCCTGGTGGCGGGTTGCGGTGCGAAACAGGGGAC
CGCTCCCGGACAGTCCCAAAGTCAGGGGGGCGATGCAAAAACCACAATAAAAGTAGGCGCTTCACCGGTACCCCATGCTG
AGATTCTAAATGTGGTAAAACCCATTCTCGAAAAAGAGGGGATCACCCTGGAGATCGTGGAGTTTACGGATTATGTGCAG
CCCAACCTCAAGCTGGCGGAAAAAGAGCTGGACGGAAACTTCTTCCAGCACATTCCGTATCTTGAGGACTTTTCAAACGA
GCATAACCTGGATTTAACGTATATTGCTAAAGTGCATATAGAGCCCATGGGAATATACTCGCAGAAGATTAAAAACCTCG
CCGAGTTAAAAGAAGGAGCTACCATTGCCATACCCAACGACGCTACCAACGGCGGGAGAGCCCTGCTGCTCCTGCAGTCG
GCCGGATTAATAAAGCTGAAGCCGGATGCCGGCATCAAAGCCACGGTAGCCGACATCGCCGAAAATCCTAAAAATATCAG
GATCTCCGAACTCGAAGCCGCCACTCTTCCGAGGGTACTGCCGGATGTGGATGCGGCGGTTATAAACACCAACTACGCCC
TGGAAGCGGGACTTGTACCCACTAAAGACGCGCTCTTTATCGAATCGGCGGATTCCCCCTATGTCAACATACTGGCGGTA
CGCAAGGGTGATGAATCGAGGCCCGAACTCAAAAAATTGGCCGAAGCCCTGAATTCACCGGAAGTCAAAAAATTTATCGA
GGAGAAGTACCAGGGCGCCGTCGTGCCCGCTTTTTGA

Protein sequence :
MKKILATVLILGLIAALVAGCGAKQGTAPGQSQSQGGDAKTTIKVGASPVPHAEILNVVKPILEKEGITLEIVEFTDYVQ
PNLKLAEKELDGNFFQHIPYLEDFSNEHNLDLTYIAKVHIEPMGIYSQKIKNLAELKEGATIAIPNDATNGGRALLLLQS
AGLIKLKPDAGIKATVADIAENPKNIRISELEAATLPRVLPDVDAAVINTNYALEAGLVPTKDALFIESADSPYVNILAV
RKGDESRPELKKLAEALNSPEVKKFIEEKYQGAVVPAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAAV_0786 YP_003281709.1 ABC transporter substrate-binding protein Not tested SaPIAv Protein 1e-43 44
nlpA AAW51766.1 NlpA Not tested AGI-3 Protein 1e-42 44