Gene Information

Name : Toce_2165 (Toce_2165)
Accession : YP_003826501.1
Strain : Thermosediminibacter oceani DSM 16646
Genome accession: NC_014377
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2164991 - 2165677 bp
Length : 687 bp
Strand : -
Note : COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR017871:IPR003439; KEGG: aoe:Clos_2616 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related; PFAM: ABC

DNA sequence : 
TTGCCGCTGATAGAACTCAGGGGCATAACCAGGCAGTACCGCAACGGCAAGGTACTTATAAACGCCCTTAACGATATAAC
CCTCGCGGTGGGAGAGGGAGAATTCCTTTCCGTAATGGGGCCTTCGGGATCGGGGAAATCCACGCTTTTGAACATAATCG
GATGCCTCGACAGGCCGACCGCCGGCGAGTACCTGTTGAACGGCATGAGGGTTGAGAGGTTGAGCGATGACAGGCTTTCT
GAGATCAGAAATCGCTACATAGGGTTTGTCTTTCAGAGCTTTCACCTGCTGCCGGGCCTGGATGCCATGGGAAATGCGGA
GCTTCCCCTCATATACAGGGGCGTTGGTACGGCGGAAAGGAGAAGGCGCGTGAGAGAAGCCCTTGAAGCCGTAGGGCTTT
CGGACCGGATTCACCACAGGCCCTCCGAGCTTTCTGGCGGGGAACAGCAGAGGGTGGCGATCGCGAGAGCTCTGGCCCAG
GAACCGGTGCTTATTCTGGCGGATGAGCCCACCGGTTCCCTGGATTCAAAAACGGGCCGGACGATCATGGAGCTGTTCCA
GAAGCTGAACTCGGAAAGGGGTATCACGATTATAATGGTCACCCATGACCGGGACATGGCCCGTTACGGGCACCGCATAG
TGAAGCTCCTCGACGGGAGGATAAAAGAAGAGGAGTTGGTGGGTTGA

Protein sequence : 
MPLIELRGITRQYRNGKVLINALNDITLAVGEGEFLSVMGPSGSGKSTLLNIIGCLDRPTAGEYLLNGMRVERLSDDRLS
EIRNRYIGFVFQSFHLLPGLDAMGNAELPLIYRGVGTAERRRRVREALEAVGLSDRIHHRPSELSGGEQQRVAIARALAQ
EPVLILADEPTGSLDSKTGRTIMELFQKLNSERGITIIMVTHDRDMARYGHRIVKLLDGRIKEEELVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1862 YP_006310627.1 amino acid ABC transporter ATP-binding protein Not tested FWisland_2 Protein 1e-24 41
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-24 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Toce_2165 YP_003826501.1 ABC transporter NC_012469.1.7686878. Protein 4e-50 56
Toce_2165 YP_003826501.1 ABC transporter NC_008702.1.4606598. Protein 1e-39 51
Toce_2165 YP_003826501.1 ABC transporter CP001581.1.gene798.p Protein 8e-37 42