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Name : Toce_2104 (Toce_2104) Accession : YP_003826441.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Unknown Product : transcription antitermination protein nusG Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 2111153 - 2111677 bp Length : 525 bp Strand : - Note : COGs: COG0250 Transcription antiterminator; InterPro IPR006645:IPR005824:IPR015869:IPR001062; KEGG: drm:Dred_0202 NusG antitermination factor; PFAM: NGN domain protein; KOW domain protein; SMART: NGN domain protein; KOW domain protein; SPTR: Transcription DNA sequence : ATGTCTAAAAACTGGTACGTAATCCATACTTATTCCGGTTACGAAAACAAGGTAAAGGCAAACCTGGAAAAGCGCGTGGA ATCCATGGGAATGCAGGACAAGATCTTCCGGGTGCTGGTCCCCGTGGAGGAAGAAGTTGAGATAAAAAACGGGAAGAAGA AGGTAACCCAGCGCAAGATATTTCCGGGATACGTCCTTGTGGAAATGATAGTTACCGACGATTCCTGGCACGTGGTTAGG AACACCCCCGGTGTCACGGGCTTTGTAGGTACCGGGAATAAACCCATTCCGCTGCAGGAATCGGAAATAAAAGCGATTTT GAAGCAGATGGGTATAGAGGAGCCCAAACCGAAGCTCGACATTGATGTCGACCAGAATGTAAAAGTCGTTTCCGGACCTT TCGAAAACTTTGTAGGCAAGGTGCTCGAGATAAACCATGAAAAACAGAAAGTAAAGGTCCTTATATCCATGTTTGGGCGG GAAACACCTATCGAGCTTGACTTTAACCAGGTGGAAAAAATATAA Protein sequence : MSKNWYVIHTYSGYENKVKANLEKRVESMGMQDKIFRVLVPVEEEVEIKNGKKKVTQRKIFPGYVLVEMIVTDDSWHVVR NTPGVTGFVGTGNKPIPLQESEIKAILKQMGIEEPKPKLDIDVDQNVKVVSGPFENFVGKVLEINHEKQKVKVLISMFGR ETPIELDFNQVEKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| nusG | YP_006310753.1 | transcription antitermination protein NusG | Not tested | FWisland_4 | Protein | 1e-37 | 48 |
| nusG | YP_281502.1 | transcription antitermination protein NusG | Not tested | Not named | Protein | 2e-32 | 47 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 5e-38 | 46 |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 5e-38 | 46 |
