Gene Information

Name : Toce_2036 (Toce_2036)
Accession : YP_003826378.1
Strain : Thermosediminibacter oceani DSM 16646
Genome accession: NC_014377
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2048380 - 2049252 bp
Length : 873 bp
Strand : -
Note : COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: cdl:CDR20291_1072 integrase, catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region; PFAM: Integrase core domain

DNA sequence :
ATGCTTTTAGAACAAAAACACTACCCTGTTTCAGCTCTATGTAAAATCACAGGAATCAGCAGATCTGCCTACTACAAGTG
GAGACATAGGGAAAAAAGCCAAAATGAACTTCAAAATGAGAAGCTGCTTGTTCTTATCAGGGAAGCATACGAGGAAAGAG
ATGGTATACTAGGTTACAGGCAAATGACAATCAAGCTTCGCCGTGAACATCAACTTAAGGTTAATCATAAACGAATTTAT
CGACTGATGAAAGTAATGGGTTTAAAATCAGTATGCAGGAAAAAGAAATATAACTACATAAAGTCAACTCCAGAAGTTAT
CGCAGAGAATGTACTAAATCGGGATTTCAAGGCAGAACATACATGTGAGAAATGGCTTACGGATGTAACGGAATTCAAAT
ATGGTAATGGCCAGAAAGCATATCTTAGCGCAATTCTTGACCTTGCAGATAGAAGCATAGTATCTTACGTTATTGGCCAT
TCAAACAACAATGCACTTGTGTTTGAGACTTTTGATTTGGCAGTTGCTAGCCATCCTGATGCAAAACCCATCTTCCATAG
TGACCGTGGCTTCCAATATACCAATAAAACCTTTAAGTCAAAACTGGATAAGGCAGGAATGACCCAGAGTATGTCTAGGG
TAGGCCGCTGCATAGATAATGGCCCTATGGAGGGATTCTGGGGAATTCTGAAATCGGAGATGTATTACTTACATAAGTTT
GATGACTATGATAGCTTGAAAAAAGCGATTGAGGAATACATAGATTACTACAATACAAGGAGATATCAGAAACGTTTAAA
ATGCATGACGCCAATTGAGTATCGCAACTATCTTGCCGGTATGCAGCATAAAGAAAGCACCAACCATTTTTGA

Protein sequence :
MLLEQKHYPVSALCKITGISRSAYYKWRHREKSQNELQNEKLLVLIREAYEERDGILGYRQMTIKLRREHQLKVNHKRIY
RLMKVMGLKSVCRKKKYNYIKSTPEVIAENVLNRDFKAEHTCEKWLTDVTEFKYGNGQKAYLSAILDLADRSIVSYVIGH
SNNNALVFETFDLAVASHPDAKPIFHSDRGFQYTNKTFKSKLDKAGMTQSMSRVGRCIDNGPMEGFWGILKSEMYYLHKF
DDYDSLKKAIEEYIDYYNTRRYQKRLKCMTPIEYRNYLAGMQHKESTNHF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 5e-43 42