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Name : Toce_1957 (Toce_1957) Accession : YP_003826305.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1971131 - 1972003 bp Length : 873 bp Strand : + Note : COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: cdl:CDR20291_1072 integrase, catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region; PFAM: Integrase core domain DNA sequence : ATGCTTTTAGAACAAAAACACTACCCTGTTTCAGCTCTATGTAAAATCACAGGAATCAGCAGATCTGCCTACTACAAGTG GAAACATAGGGAAAAAAGCCAAAATGAACTTCAAAATGAGAAGCTGCTTGTTCTTATCAGGGAAGCATACGAGGAAAGAG ATGGTATACTAGGTTACAGGCAAATGACAATCAAGCTTCGCCGTGAACATCAACTTAAGGTTAATCATAAACGAATTTAT CGACTGATGAAAGTAATGGGTTTAAAATCAGTATGCAGGAAAAAGAAATATAACTACATAAAGTCAACTCCAGAAGTTAT CGCAGAGAATGTACTAAATCGGGATTTCAAGGCAGAACATACATGTGAGAAATGGCTTACGGATGTAACGGAATTCAAAT ATGGTAATGGCCAGAAAGCATATCTTAGCGCAATTCTTGACCTTGCAGATAGAAGCATAGTATCTTACGTTATTGGCCAT TCAAACAACAATGCACTTGTGTTTGAGACTTTTGATTTGGCAGTTGCTAGCCATCCTGATGCAAAACCCATCTTCCATAG TGACCGTGGCTTCCAATATACCAATAAAACCTTTAAGTCAAAACTGGATAAGGCAGGAATGACCCAGAGTATGTCTAGGG TAGGCCGCTGCATAGATAATGGCCCTATGGAGGGATTCTGGGGAATTCTGAAATCGGAGATGTATTACTTACATAAGTTT GATGACTATGATAGCTTGAAAAAAGCGATTGAGGAATACATAGATTACTACAATACAAGGAGATATCAGAAACGTTTAAA ATGCATGACGCCAATTGAGTATCGCAACTATCTTGCCGGTATGCAGCATAAAGAAAGCACCAACCATTTTTGA Protein sequence : MLLEQKHYPVSALCKITGISRSAYYKWKHREKSQNELQNEKLLVLIREAYEERDGILGYRQMTIKLRREHQLKVNHKRIY RLMKVMGLKSVCRKKKYNYIKSTPEVIAENVLNRDFKAEHTCEKWLTDVTEFKYGNGQKAYLSAILDLADRSIVSYVIGH SNNNALVFETFDLAVASHPDAKPIFHSDRGFQYTNKTFKSKLDKAGMTQSMSRVGRCIDNGPMEGFWGILKSEMYYLHKF DDYDSLKKAIEEYIDYYNTRRYQKRLKCMTPIEYRNYLAGMQHKESTNHF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 3e-43 | 42 |
