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Name : Toce_0190 (Toce_0190) Accession : YP_003824601.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 189379 - 190233 bp Length : 855 bp Strand : - Note : COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: cdl:CDR20291_1072 integrase, catalytic region; PFAM: Integrase catalytic region; SPTR: Integrase, catalytic region; PFAM: Integrase core domain DNA sequence : ATGCTTTTAGAACAAAAACACTACCCTGTTTCAGCTCTATGTAAAATCACAGGAATCAGCAGATCTGCCTACTACAAGTG GAGACATAGGGAAAAAAGCCAAAATGAACTTCAAAATGAGAAGCTGCTTGTTCTTATCAGGGAAGCATACGAGGAAAGAG ATGGTATACTAGGTTACAGGCAAATGACAATCAAGCTTCGCCGTGAACATCAACTTAAGGTTAATCATAAACGAATTTAT CGACTGATGAAAGTAATGGGTTTAAAATCAGTATGCAGGAAAAAGAAATATAACTACATAAAGTCAACTCCAGAAGTTAT CGCAGAGAATGTACTAAATCGGGATTTCAAGGCAGAACATACATGTGAGAAATGGCTTACGGATGTAACGGAATTCAAAT ATGGTAATGGCCAGAAAGCATATCTTAGCGCAATTCTTGACCTTGCAGATAGAAGCATAGTATCTTACGTTATTGGCCAT TCAAACAACAATGCACTTGTGTTTGAGACTTTTGATTTGGCAGTTGCTAGCCATCCTGATGCAAAACCCATCTTCCATAG TGACCGTGGCTTCCAATATACCAATAAAACCTTTAAGTCAAAACTGGATAAGGCAGGAATGACCCAGAGTATGTCTAGGG TAGGCCGCTGCATAGATAATGGCCCTATGGAGGGATTCTGGGGAATTCTGAAATCGGAGATGTATTACTTACATAAGTTT GATGACTATGATAGCTTGAAAAAAGCGATTGAGGAATACATAGATTACTACAATACAAGGAGATATCAGAAACGTTTAAA ATGCATGACGCCAATTGAGTATCGCAACTATCTGTCAATAGCGGATTTAAATTGA Protein sequence : MLLEQKHYPVSALCKITGISRSAYYKWRHREKSQNELQNEKLLVLIREAYEERDGILGYRQMTIKLRREHQLKVNHKRIY RLMKVMGLKSVCRKKKYNYIKSTPEVIAENVLNRDFKAEHTCEKWLTDVTEFKYGNGQKAYLSAILDLADRSIVSYVIGH SNNNALVFETFDLAVASHPDAKPIFHSDRGFQYTNKTFKSKLDKAGMTQSMSRVGRCIDNGPMEGFWGILKSEMYYLHKF DDYDSLKKAIEEYIDYYNTRRYQKRLKCMTPIEYRNYLSIADLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 5e-43 | 42 |
