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Name : Toce_1930 (Toce_1930) Accession : YP_003826282.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Virulence Product : type II secretion system protein E (GspE) Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1937003 - 1938700 bp Length : 1698 bp Strand : - Note : COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR003593:IPR001482:IPR007831; KEGG: mta:Moth_1554 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system DNA sequence : GTGGACGGTAAACGCCGGCTGGGGGACCTGCTGGTGGAGGCGGGCATGCTTACCCCCGAACAGCTGGAGAAGGCCTTAAA TGAACAAAAGCGGAGCGGAGAGCGCCTGGGCAAGGTACTTACGCGCCTGGGGTATGTGAGCGAGAAGGATATCCTGGAGG TCCTGGAATTTCAGCTGGGTATACCTAAAGTGGTAGTGGAAGATTACCAGCTGGAACCTGAGGTGGTACGGCTGATACCG GAGCGCCTGGCTCGCCGCCACATGGCTATACCCGTCCGCCGGGACGGGAATAGACTGCTGGTGGCCATGGCGGACCCTTT AAACCTTACAGCACTGGATGACCTGCGCCTGGCTACGGGATTTGAAATCATACCGGCCATCGCCTCGGAAAGAGAGATTG AAACGGCTTTGTCCCGTTTCTGGCAGTCCTTCCTGGAAAATCAGGCCATGGCCGGTTTTGAGGAGACAGCGGCGGATACC TCTGCGGCCGCATGGGACTCCTTCGACCTGGATGAAGCGGCCGAGACCGGTATAGAAGGTGCGCCGGCAGTTCAGCTGGT GAACCGGCTGATTGCCCAGGCCGTGCGCGCCAGAGCCAGCGATATCCATATCGAACCTCAGGAAGGGAGCGTGCTGGTGC GCTTCCGGGTGGACGGGCTTTTGCGGGAAGTGCTTCGCCTGCCACCGGGGGTGCTTAGCAGCCTGACTTCCCGAATAAAA ATTATGGGGGGTATGGATATCGCCGAAAAGCGGCTGCCTCAGGACGGCCGTTTCCAGATAACGCTGGAGAGGCGCAGTAT AGACCTGCGCGTTTCCACCATGCCCACCGTTTATGGCGAAAAAGTTGTGCTGCGTATCCTGGATAAAAAAACTATGCTCC TTACTCTCGATAAGCTGGGCTTTTCGCCCGCTACCAAGGAGCAGTATGAAAGTTTGATACGCAGCACTTACGGAATGATT TTGATCACCGGTCCCACCGGCAGCGGCAAGACCACCACCCTCTACGCCACTTTAAACGCCCTGAGTTCCCCGGAAAAAAA TATAATCACCATAGAAGATCCTGTAGAATACCTTTTGCCCGGCATCAATCAGGTGCAGGTAAACCCCAAAGTAGGCCTGG ATTTTGCAGCGGGCTTGAGGGCTATTTTGCGCCAGGACCCGGATATTATAATGGTAGGGGAGATTCGCGACAGGGAGACG GCTGATATAGCCGTCCGGGCGGCTACAACGGGCCACCTCGTTTTCAGCACGCTGCACACCAACGACGCGGCCGGGGCGGT GACAAGGCTGCTGGACATGGGTGTGGAGCCGTTTCTCGTAAATTCTTCCCTGATCGGTGTGGTGGCCCAGCGTCTTGTCC GCCTCATCTGCCCGCAGTGCCGCGAGCCCTACGAACCGGCGCCCGGCGATGCGGCCTACGCCTTCCTCGGGGAAAACATA GACAAAAAGTTTTACCGGGGCCGCGGCTGCCGGCAGTGCAATTACACAGGATACCAGGGCAGGACTGCTATCCAGGAAAT CCTGGTGATGACCGATGAAATTCGCTCTCTCGTGGCTGCCAAAGCACCCGTTACGGAAATAAAAAAGGCTGCCGTCGCCG GCGGAATGGTTACCTTGCGGGAAGACGGACTTTTAAAGGCCGGCCAGGGATTAACCACAGTGGAAGAAGTGATTCGCGTG TCCATGGGCGAATTTTAG Protein sequence : MDGKRRLGDLLVEAGMLTPEQLEKALNEQKRSGERLGKVLTRLGYVSEKDILEVLEFQLGIPKVVVEDYQLEPEVVRLIP ERLARRHMAIPVRRDGNRLLVAMADPLNLTALDDLRLATGFEIIPAIASEREIETALSRFWQSFLENQAMAGFEETAADT SAAAWDSFDLDEAAETGIEGAPAVQLVNRLIAQAVRARASDIHIEPQEGSVLVRFRVDGLLREVLRLPPGVLSSLTSRIK IMGGMDIAEKRLPQDGRFQITLERRSIDLRVSTMPTVYGEKVVLRILDKKTMLLTLDKLGFSPATKEQYESLIRSTYGMI LITGPTGSGKTTTLYATLNALSSPEKNIITIEDPVEYLLPGINQVQVNPKVGLDFAAGLRAILRQDPDIIMVGEIRDRET ADIAVRAATTGHLVFSTLHTNDAAGAVTRLLDMGVEPFLVNSSLIGVVAQRLVRLICPQCREPYEPAPGDAAYAFLGENI DKKFYRGRGCRQCNYTGYQGRTAIQEILVMTDEIRSLVAAKAPVTEIKKAAVAGGMVTLREDGLLKAGQGLTTVEEVIRV SMGEF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 2e-88 | 47 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-88 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Toce_1930 | YP_003826282.1 | type II secretion system protein E (GspE) | VFG2048 | Protein | 3e-90 | 46 |
| Toce_1930 | YP_003826282.1 | type II secretion system protein E (GspE) | VFG0233 | Protein | 1e-85 | 44 |
| Toce_1930 | YP_003826282.1 | type II secretion system protein E (GspE) | VFG0112 | Protein | 2e-89 | 43 |
| Toce_1930 | YP_003826282.1 | type II secretion system protein E (GspE) | VFG1880 | Protein | 2e-86 | 41 |
