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Name : Toce_0176 (Toce_0176) Accession : YP_003824589.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 176305 - 177585 bp Length : 1281 bp Strand : + Note : COGs: COG0172 Seryl-tRNA synthetase; InterProIPR002317:IPR015866:IPR002314:IPR018156:IPR 006195; KEGG: tte:TTE0025 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like; PRIAM: Serine--tRNA ligase; SPTR DNA sequence : ATGTTAGATATTAAAATGATCCGTTCAAACCCCGATGAAGTGAAGCGAGCACTGGAAAAGAGGGGTACCCAGGCGAACCT TGAAGAGTTTTTAAAGCTCGACGAAGAGCGAAGAAACCTCTTGGTCGAGGTAGAGCAACTCAAAAGCCTGCGCAACAGGG AGTCGGAGGAAATCGCCCGCAGGAAGAAACAGGGTGAACCGGCCGACGACCTCATACGGCAGATGAGGGAAGTATCCGAC AGAATCAAGGAAATGGACGAGAAGGTCAAAGAGATTGAGGAAAAACTGGAACAGATCCTGCTCATGATCCCAAACATACC CGACGAATCGGTGCCGGTGGGAGAAAGTGACGCCGATAACGTGGAAATGAGGCGCTGGGGCGAGCCCCGAAAGTTTGACT TTGAACCCAAGCCTCACTGGGAATTGGGTGAGGCTCTGGACATATTGGACTTCGAGCGGGCCTCCAAGATAACCGGCTCC AGATTTGTGGTTTATAAGGGGGCCGGGGCAAGGCTGGAGAGGGCGTTAATCAACTTCATGCTGGACCTCCATATAGAAAA ACACGGGTATAAAGAGATATTCCCGCCCTTTATCGTAAACCGGGCCAGCATGACGGGCACCGGCCAATTGCCGAAATTTG AGGAGGAGGCATTCAAGCTCTTCAACAATACGGATTATTTCCTTATTCCTACCGCGGAAGTGCCGGTGACGAATCTACAC GCGAACGAGATCCTGGAAAAAGAAGACCTGCCCATATACTACGTGGCCTACAGCGGCTGCTTCAGGGCCGAAGCCGGATC AGCGGGCAGGGATACAAGGGGAATCATAAGGCAGCACCAGTTCAATAAAGTAGAGTTGGTAAAGTTTACCGAACCTGAAA AGTCCATGGAAGAACTTGAAAAACTCACCGCCGATGCGGAAGAGGTGCTGCAGCTTCTGGGACTGCCCTACAGGGTCGTG GCGCTCTGCACCGGCGATCTGGGATTCGCCTCGTCTAAGACTTACGATATCGAGGTATGGATGCCAAGCTACAACCGCTA CGTGGAAATCTCGTCGTGCAGCAACTTCAAGGATTACCAGGCCCGCAGGGCTAATATCAGATACAGGCCGGAAAAGGGTG CCAAACCCCAATACGTCCACACCCTTAACGGCTCCGGACTGGCGGTTGGCAGGACGACCGCAGCCATACTGGAAAACTAC CAGCAGCCCGACGGATCGGTAGTAATACCCGAGGTGCTGAGGCCGTATATGGGCGGCATGGAGGTAATAGCTAAAAAATA A Protein sequence : MLDIKMIRSNPDEVKRALEKRGTQANLEEFLKLDEERRNLLVEVEQLKSLRNRESEEIARRKKQGEPADDLIRQMREVSD RIKEMDEKVKEIEEKLEQILLMIPNIPDESVPVGESDADNVEMRRWGEPRKFDFEPKPHWELGEALDILDFERASKITGS RFVVYKGAGARLERALINFMLDLHIEKHGYKEIFPPFIVNRASMTGTGQLPKFEEEAFKLFNNTDYFLIPTAEVPVTNLH ANEILEKEDLPIYYVAYSGCFRAEAGSAGRDTRGIIRQHQFNKVELVKFTEPEKSMEELEKLTADAEEVLQLLGLPYRVV ALCTGDLGFASSKTYDIEVWMPSYNRYVEISSCSNFKDYQARRANIRYRPEKGAKPQYVHTLNGSGLAVGRTTAAILENY QQPDGSVVIPEVLRPYMGGMEVIAKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-119 | 62 |
