|
Name : Toce_1741 (Toce_1741) Accession : YP_003826099.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Unknown Product : alpha amylase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.10 Position : 1740161 - 1741831 bp Length : 1671 bp Strand : - Note : COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: ate:Athe_0165 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase catalytic region; PFAM: Alpha amylase, cataly DNA sequence : ATGAACAGAAAATGGTGGAAAGAAGCCGTAGTCTACCAAATATACCCGAGGAGCTTTTACGATTCCAACGGTGACGGTAT AGGCGATTTGAGGGGAATTATCCAGAAACTAGATTACCTGAAGGAGCTGGGTGTGGACGCGATCTGGCTCAACCCGGTGT ACAAATCGCCGAATGCTGACAACGGTTATGATGTCAGCGATTACTACGATATTATGGATGAGTTTGGCACTATGGCCGAT TTCGACGAACTGCTTCAAGAGGCGCACAGGAGGGGAATGAAGCTCATTATGGACCTTGTGGTGAACCACACCTCCGACGA GCACAAATGGTTCATAGAATCCCGCTCCTCGAAGCACAGTCCTTACAGGGACTATTACATATGGAGGGAAGGGCAGAACG GCCGGGAGCCCAACAATTGGGTTTCCATATTCGGCGGCCCTGCCTGGGAATATGACGAAAGGACCGGGGAGTATTACCTG CACCTGTTTGCCGTCAAGCAGCCGGACCTTAACTGGGAAAATCCGCGGTTGAGGAAAGAAATCTACGAAATGATAAACTG GTGGTTAAAGAAAGGCATCGACGGTTTCAGGTTGGACGCTATCAACCTGATCTCGAAAGTTGAAGGGCTTCCCGACGATC CTAATCCTCAGGGGGAAAGATTCCCGGGTTCCAGATTTTACTTGAACGGCCCGAAAGTTCATGACTATCTGCATGAGATG TACAGGGAAGCCTTTAGCAAATACGACATAATGACGGTGGGGGAAATACCCGGAGTGACGCCGGAAATCGGTAGGCTTTA TGTCGATGAGGACAGAGAAGAGCTGAACATGATCATCCACTTTGAACTCATGGATTTGGACTGCGGATCCGGAGGAAAGT GGGATGTGGTACCCTGGAAGCTTACCGACTTTAAGAAGATCATGTATAACTGGTATAAAGGATTGAAGTATAAAGGCTGG GTAGCCCTTTATCTCAACAACCACGACCAGCCGAGGATGGTTTCCCGCTTCGGCAACGACGGCAGGTACAGGGTGCAGTC GGCCAAAATGCTGGCGACACTCCTGCACACCTGGCAGGGCACCCCGTTTATTTACCAGGGCGAGGAAATCGGTATGACCA ATGTAGCCTTTGACAGCATCGAAGACTACAGGGATATAGAGACTTTAAACTGGTATAACGAAAAGGTAAAGGGGGGTTAT GACCCCGAAAGGTTGATGAAGGCCATCCACGCCAGGAGCAGGGATAACGCCAGAACTCCCATGCAATGGAACTCCGGTCC AAATGCGGGATTCACAACGGGCATCCCTTGGATAAAGGTCAATCCAAACTACAGAGAAATCAACGTAGAAAATGCACTTA AAGACCCCGATTCGGTTTTTTACTACTACAAAAAGCTAATCGAACTCAGGAAAAAGCACCCTGCGATAGTATACGGGGAC GTAAATATGATCCTTGAGGATGATGAAAACATCTTTGCTTACACCCGGACCCTTGATGATGATAAACTGCTGGTGGTTCT CAATTTTTTCGAAAATGAAGTCGAGTTTGTGCTCTCCGACGAGGTCGAATTCAGAGATTATAAACTTCTGCTTTCCAATT ATCCCGTAGAGGGTGATTTAAAGAGGACTATTCTGAAACCTTACGAAGCAAGGGTTTATAAATTATTTTAG Protein sequence : MNRKWWKEAVVYQIYPRSFYDSNGDGIGDLRGIIQKLDYLKELGVDAIWLNPVYKSPNADNGYDVSDYYDIMDEFGTMAD FDELLQEAHRRGMKLIMDLVVNHTSDEHKWFIESRSSKHSPYRDYYIWREGQNGREPNNWVSIFGGPAWEYDERTGEYYL HLFAVKQPDLNWENPRLRKEIYEMINWWLKKGIDGFRLDAINLISKVEGLPDDPNPQGERFPGSRFYLNGPKVHDYLHEM YREAFSKYDIMTVGEIPGVTPEIGRLYVDEDREELNMIIHFELMDLDCGSGGKWDVVPWKLTDFKKIMYNWYKGLKYKGW VALYLNNHDQPRMVSRFGNDGRYRVQSAKMLATLLHTWQGTPFIYQGEEIGMTNVAFDSIEDYRDIETLNWYNEKVKGGY DPERLMKAIHARSRDNARTPMQWNSGPNAGFTTGIPWIKVNPNYREINVENALKDPDSVFYYYKKLIELRKKHPAIVYGD VNMILEDDENIFAYTRTLDDDKLLVVLNFFENEVEFVLSDEVEFRDYKLLLSNYPVEGDLKRTILKPYEARVYKLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 3e-146 | 57 |
