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Name : Toce_0164 (Toce_0164) Accession : YP_003824578.1 Strain : Thermosediminibacter oceani DSM 16646 Genome accession: NC_014377 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : - Position : 157250 - 158722 bp Length : 1473 bp Strand : + Note : COGs: COG1190 Lysyl-tRNA synthetase (class II); InterProIPR002313:IPR004365:IPR004364:IPR018149:IPR 006195; KEGG: csc:Csac_0828 lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; SPTR: Lysyl DNA sequence : ATGGGGAATTTGGAGCTTGAAGCCAACGAAATAATAAGGGCTAGACTGCAGAAACTGGAGGAACTCCGTTCCATGGGGAT AGCCCCATACGGGCAAAAATACGTTAGAACTCACAACTGCCTTGAGATCAAAGAGAACTTCGAGAAGCTCGAAGGCAGCG AGACTTCTATAGCCGGACGAATAATGGCCATACGGGGTCACGGCAAGGCGGCTTTTTTTGACATTCAGGACGAAAAGGGC CGCCTGCAAATATACATAAAGAAGGACCACGTGGGTGACGAAGTTTACGAGATCTTTAAGAAACTCGACATCGGGGACAT TATAGGCGTAGAAGGGAAAATATTCAAAACTCAAAAAGGTGAGATATCGGTCATGGCCGACAGGATAACGGTGCTGGCCA AATCTTTAAGACCCCTGCCCGAGAAGTGGCACGGCTTGAAAGATGTGGATACAAGATACCGCCAACGCTACCTGGACCTC ATCGTGAACCCCGATGTGAGGAGGACCTTCGTCACCAGAAGCAAAATAATAAGGGCTATAAGGAACTACCTGGACAGTCG CGGATTTATAGAGGTAGAGACGCCGGTACTCACGCCTCTGGCGGGTGGTGCGGCCGCAAGGCCCTTCATAACCCACCACA ACGCGCTCGACATTGACCTGTACCTGCGGATCGCCACCGAGCTTTATTTAAAGAGGCTCATCGTCGGCGGCTTTGAAAAG GTCTACGAGATAGGCAAGGATTTCAGGAATGAAGGTATATCGATAAAGCATAATCCCGAATTCACGATGATAGAACTCTA CCAGGCTTACGCTGACTACCAAGATATGATGGAACTTACCGAAGACATGATTTCCCACGTGGCGAAAGAAGTGTTGGGGA CTACGAAGGTGGTATATCAGGGCGAGGAAATAGACCTCACTCCACCCTGGACCAGAATGACCATGGTGGAGGCTGTAAAG AAATACGCCGGGGTGGACTTTAACGAGCTGAAAACCGATGAGGAGGCAAGAGCGGTTGCCAGAAAACTGGGCCTTGAAGT TGGAGATAATGATACCAGGGGCAAGGTTTTAAATACCATATTCGAGGAAAAGGTGGAAGAACACCTGGTTCAGCCTACTT TTATACTGGACTACCCCATCGAGATATCGCCTCTGGCCAAGCGAAAAGAGGACAACCCCGATTTCACTTACCGATTCGAG CTCTTTATAACCCGCAGGGAAACGGCAAATGCCTTTTCCGAGCTGAACGACCCAATCGATCAGCGGGAGAGGTTCCTGCA GCAGCTAAAAGAACGGGAGGCCGGAGACGAGGAGGCCCATGCCTTTGATGAGGACTTCATAAACGCTCTGGAGTACGGAA TGCCTCCGACGGGAGGGCTCGGGATAGGCATAGATCGGCTGGTAATGCTGCTTACGGACTCCTATTCCATAAGGGACGTC ATCCTGTTCCCCACCATGAGGCCAAAGTCCTAA Protein sequence : MGNLELEANEIIRARLQKLEELRSMGIAPYGQKYVRTHNCLEIKENFEKLEGSETSIAGRIMAIRGHGKAAFFDIQDEKG RLQIYIKKDHVGDEVYEIFKKLDIGDIIGVEGKIFKTQKGEISVMADRITVLAKSLRPLPEKWHGLKDVDTRYRQRYLDL IVNPDVRRTFVTRSKIIRAIRNYLDSRGFIEVETPVLTPLAGGAAARPFITHHNALDIDLYLRIATELYLKRLIVGGFEK VYEIGKDFRNEGISIKHNPEFTMIELYQAYADYQDMMELTEDMISHVAKEVLGTTKVVYQGEEIDLTPPWTRMTMVEAVK KYAGVDFNELKTDEEARAVARKLGLEVGDNDTRGKVLNTIFEEKVEEHLVQPTFILDYPIEISPLAKRKEDNPDFTYRFE LFITRRETANAFSELNDPIDQRERFLQQLKEREAGDEEAHAFDEDFINALEYGMPPTGGLGIGIDRLVMLLTDSYSIRDV ILFPTMRPKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 4e-128 | 54 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-89 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Toce_0164 | YP_003824578.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 2e-128 | 54 |
